Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1951
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    24   5.9  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   7.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   7.8  

>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 206 RNAIFLQLILFIT*MLYLYLYIHFRLTHGPNAKQSV 313
           RN I  +  L  T  ++ +L  HF L  GP  +  +
Sbjct: 473 RNCIGSRFALMETKAVFFFLLTHFLLEAGPRTQHPI 508


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 299 AKQSVYYECEPTALRLLSI*MLRNMHMH*YLLLRDASVN 415
           A Q++   C P   ++     + N H+H  + LRD  VN
Sbjct: 91  AHQAILSACSPYFEQIF----VENKHLHPIIYLRDVEVN 125


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +2

Query: 536 PTNNLHWYIAPDGRQCNTLRSSNSQQRTW 622
           P NN +W +   GR       S   QR W
Sbjct: 40  PPNNGNWAVDSSGRVAVVAAGSRPIQRMW 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,590
Number of Sequences: 2352
Number of extensions: 18586
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)