Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1950
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical ... 73 3e-13
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 73 3e-13
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 70 1e-12
Z81016-2|CAB02663.1| 246|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 31 0.62
AL132948-21|CAC51051.2| 453|Caenorhabditis elegans Hypothetical... 31 1.1
AF077536-4|AAK31409.1| 726|Caenorhabditis elegans Hypothetical ... 31 1.1
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF047652-6|AAC04390.3| 397|Caenorhabditis elegans Hypothetical ... 30 1.4
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 30 1.9
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 30 1.9
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 30 1.9
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 29 4.4
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 4.4
CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 29 4.4
Z82265-4|CAB05174.1| 293|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 28 7.7
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 28 7.7
>AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical
protein Y17G7B.2c protein.
Length = 462
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG--YQLGKL-VPFMTNYLFICKNCSPTGLETF 440
CYC R L E++C++C +WFH C+ ++L VPFM Y F CK C PT E +
Sbjct: 22 CYCDGKRELGSVEVVCSTCLKWFHGRCLKEFHELNSNGVPFMICYTFTCKQCRPTA-EDW 80
Query: 441 KKNQAPFPQMCLTAIANLQQDSVK 512
K +A QMC+T +A L + +K
Sbjct: 81 KAKKADLVQMCVTVLATLSAERLK 104
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/45 (22%), Positives = 26/45 (57%)
Frame = +2
Query: 548 EIIPYIDQYWEAMTTMPRRVTQSWYATVQRALIKDIQVLFTYEED 682
EI+PY+++ W +T + ++ + W+ + L+K+ + + +D
Sbjct: 126 EIVPYMNENWYMLTAIKQK--KEWHQNLAPTLLKEKNIFVQHNDD 168
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG--YQLGKL-VPFMTNYLFICKNCSPTGLETF 440
CYC R L E++C++C +WFH C+ ++L VPFM Y F CK C PT E +
Sbjct: 22 CYCDGKRELGSVEVVCSTCLKWFHGRCLKEFHELNSNGVPFMICYTFTCKQCRPTA-EDW 80
Query: 441 KKNQAPFPQMCLTAIANLQQDSVK 512
K +A QMC+T +A L + +K
Sbjct: 81 KAKKADLVQMCVTVLATLSAERLK 104
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/45 (22%), Positives = 26/45 (57%)
Frame = +2
Query: 548 EIIPYIDQYWEAMTTMPRRVTQSWYATVQRALIKDIQVLFTYEED 682
EI+PY+++ W +T + ++ + W+ + L+K+ + + +D
Sbjct: 126 EIVPYMNENWYMLTAIKQK--KEWHQNLAPTLLKEKNIFVQHNDD 168
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG--YQLGKL---VPFMTNYLFICKNCSPTGLE 434
CYC R L E++C++C +WFH C+ ++ + VPFM Y F CK C PT E
Sbjct: 22 CYCDGKRELGSVEVVCSTCLKWFHGRCLKEFHEFSRNSNGVPFMICYTFTCKQCRPTA-E 80
Query: 435 TFKKNQAPFPQMCLTAIANLQQDSVK 512
+K +A QMC+T +A L + +K
Sbjct: 81 DWKAKKADLVQMCVTVLATLSAERLK 106
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/45 (22%), Positives = 26/45 (57%)
Frame = +2
Query: 548 EIIPYIDQYWEAMTTMPRRVTQSWYATVQRALIKDIQVLFTYEED 682
EI+PY+++ W +T + ++ + W+ + L+K+ + + +D
Sbjct: 128 EIVPYMNENWYMLTAIKQK--KEWHQNLAPTLLKEKNIFVQHNDD 170
>Z81016-2|CAB02663.1| 246|Caenorhabditis elegans Hypothetical
protein F21G4.4 protein.
Length = 246
Score = 32.7 bits (71), Expect = 0.27
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 285 DRNLNIAELLCASCNRWFHESCIGYQLGKLVP 380
D++ C C W+H +C+G++ K VP
Sbjct: 206 DKSSKFGSCGCVGCGDWYHITCVGFKKAKEVP 237
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 31.5 bits (68), Expect = 0.62
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 258 SQGTCYCGK-DRNLNIAELLCASCNRWFHESCI 353
++G C K ++ N+ + C+ CN+WFH C+
Sbjct: 869 AKGHCISAKYEKRKNLQWVSCSICNQWFHVWCV 901
>AL132948-21|CAC51051.2| 453|Caenorhabditis elegans Hypothetical
protein Y39B6A.29 protein.
Length = 453
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +2
Query: 83 TQEMIRSDLKIAFC*GCLCLIIT 151
T++ I S++ IA+C GC+CL+++
Sbjct: 134 TRKTIESNINIAWCVGCICLLLS 156
>AF077536-4|AAK31409.1| 726|Caenorhabditis elegans Hypothetical
protein C16A11.3 protein.
Length = 726
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIGYQLGKLVPFMTNYLFICKNCSP 422
C CG + N N + C C +W H C+G + V T Y C++C P
Sbjct: 26 CQCGTN-NTNNRLIKCVGCAQWQHAVCMGVRPTDCV---TAYK--CEDCEP 70
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +3
Query: 252 CESQGTC-YCGKDRNLNIAELLCASCNRWFHESCIGYQLGKLVPFMTNYLFICKNCSP 422
C S C C ++ LN + C+ C++W H +C G + + C C P
Sbjct: 635 CASLRKCPRCERNYQLNEKLIRCSQCSKWQHGACEGLYTDEQLEQAAIDRMRCSACRP 692
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +3
Query: 252 CESQGTC-YCGKDRNLNIAELLCASCNRWFHESCIGYQLGKLVPFMTNYLFICKNCSP 422
C S C C ++ LN + C+ C++W H +C G + + C C P
Sbjct: 635 CASLRKCPRCERNYQLNEKLIRCSQCSKWQHGACEGLYTDEQLEQAAIDRMRCSACRP 692
>AF047652-6|AAC04390.3| 397|Caenorhabditis elegans Hypothetical
protein C34H4.1 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 563 IDQYWEAMTTMPRRVTQSWYATVQRALIKDIQVLFTYEEDSSDGPMFG 706
+ Q W M+T + T+ +++ + V F Y E++ DG MFG
Sbjct: 242 VSQQWVDMSTYQTTAATTTGYTMSQSVSNNSTVNFKYTENAGDGGMFG 289
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG 356
C C K + + + C C RW+H C+G
Sbjct: 121 CTCQKIFDASKLYIQCELCARWYHGDCVG 149
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG 356
C C K + + C SC WFH C+G
Sbjct: 181 CVCQKPYDDTKFYVGCDSCQGWFHPECVG 209
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG 356
C C K + + + C C RW+H C+G
Sbjct: 1974 CTCQKIFDASKLYIQCELCARWYHGDCVG 2002
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG 356
C C K + + C SC WFH C+G
Sbjct: 2034 CVCQKPYDDTKFYVGCDSCQGWFHPECVG 2062
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG 356
C C K + + + C C RW+H C+G
Sbjct: 400 CTCQKIFDASKLYIQCELCARWYHGDCVG 428
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG 356
C C K + + C SC WFH C+G
Sbjct: 460 CVCQKPYDDTKFYVGCDSCQGWFHPECVG 488
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG 356
C C K + + + C C RW+H C+G
Sbjct: 218 CTCQKIFDASKLYIQCELCARWYHGDCVG 246
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG 356
C C K + + C SC WFH C+G
Sbjct: 278 CVCQKPYDDTKFYVGCDSCQGWFHPECVG 306
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG 356
C C K + + + C C RW+H C+G
Sbjct: 113 CTCQKIFDASKLYIQCELCARWYHGDCVG 141
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIG 356
C C K + + C SC WFH C+G
Sbjct: 173 CVCQKPYDDTKFYVGCDSCQGWFHPECVG 201
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIGYQLGKLVPFMTNYLFICKNCSPTGLETFKKN 449
C+CG D + + C C W H +C+G L + C+ C P L K
Sbjct: 829 CHCGMDHG-DGDTIECEGCKTWQHMACMGLTLKS-----NTSKYKCEMCLPRRLPVSKAE 882
Query: 450 QA 455
A
Sbjct: 883 AA 884
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 312 LCASCNRWFHESCIGYQLGKLVPFMTNYLFICKNCS 419
LC C +W H C G + + N F CKNC+
Sbjct: 255 LCTKCQKWVHLKCTGIRSKQ-----WNSQFQCKNCT 285
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESCIGYQLGKLVPFMTNYLFICKNCSPTGLETFKKN 449
C+CG D + + C C W H +C+G L + C+ C P L K
Sbjct: 821 CHCGMDHG-DGDTIECEGCKTWQHMACMGLTLKS-----NTSKYKCEMCLPRRLPVSKAE 874
Query: 450 QA 455
A
Sbjct: 875 AA 876
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical protein
ZK593.4 protein.
Length = 1477
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 276 CGKDRNLNIAELLC-ASCNRWFHESCIGYQLGKL 374
C K ++ ++C A C WFH C+G+ L ++
Sbjct: 1419 CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREI 1452
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 246 NFCESQGTCYCGKDRNLNIAELLCASCNRWFHESCIGY--QLGKLVPFMTNYLFICKNCS 419
+FC GT + K+ L + C C R H SC+ + + K++ CK+C+
Sbjct: 258 DFCS--GTAFMNKNTKLPEDLVSCHDCGRSGHPSCLNFNQNVTKIIKRSGWQCLECKSCT 315
Query: 420 PTG 428
G
Sbjct: 316 ICG 318
>CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNR-WFHESCIG 356
C+C D+N + E C WFH +CIG
Sbjct: 178 CWCQLDKNDTMIECENPGCKYGWFHFTCIG 207
>Z82265-4|CAB05174.1| 293|Caenorhabditis elegans Hypothetical
protein F02H6.6 protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 628 CSIPRLGHPSGHCGHSFPILVNVWYDLSVFAEQTSIA 518
C+ PR P C P +VN WY + ++ T A
Sbjct: 79 CNYPRTNGPGAPCCIGTPKIVNNWYHCASTSQTTPTA 115
>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
protein C44B9.4 protein.
Length = 1150
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 309 LLCASCNRWFHESCIGYQLGKLVPFMTNYLFICKN 413
L C C FH +CIGY+ L P Y C+N
Sbjct: 72 LCCEQCPASFHLACIGYESSDL-PDDNFYCNRCRN 105
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESC 350
C G +++ N ++C +C R FH C
Sbjct: 307 CVIGCEKSSNSKTIMCKTCCRSFHSGC 333
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 270 CYCGKDRNLNIAELLCASCNRWFHESC 350
C G +++ N ++C +C R FH C
Sbjct: 307 CVIGCEKSSNSKTIMCKTCCRSFHSGC 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,568,465
Number of Sequences: 27780
Number of extensions: 313938
Number of successful extensions: 782
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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