Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1948
(771 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060948-1|AAL28496.1| 784|Drosophila melanogaster GM08606p pro... 93 4e-19
AE013599-3826|AAF47171.1| 784|Drosophila melanogaster CG4065-PA... 93 4e-19
AE013599-3825|AAX52681.1| 783|Drosophila melanogaster CG4065-PB... 93 4e-19
AY089452-1|AAL90190.1| 708|Drosophila melanogaster AT26759p pro... 68 2e-11
AY118816-1|AAM50676.1| 661|Drosophila melanogaster GH24245p pro... 31 2.3
AE013599-3405|AAF46854.1| 661|Drosophila melanogaster CG4610-PA... 31 2.3
AF149797-1|AAF03220.2| 450|Drosophila melanogaster Drep4 protein. 30 4.0
AE014134-2322|AAF53276.1| 450|Drosophila melanogaster CG9414-PA... 30 4.0
AB036773-1|BAA97120.1| 450|Drosophila melanogaster Caspase-acti... 30 4.0
>AY060948-1|AAL28496.1| 784|Drosophila melanogaster GM08606p protein.
Length = 784
Score = 93.1 bits (221), Expect = 4e-19
Identities = 65/197 (32%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Frame = +1
Query: 256 RDKLVLLLDEFATLQEEAESVDAITSGSMGT----GDCPC---------FSTWVLYHVLR 396
RDKL L++ F T+Q +A +D++ + G+ P FSTWVLY+ R
Sbjct: 490 RDKLARLIENFDTIQVDAARLDSMMNQLANERAMEGNEPMATALKHSTHFSTWVLYNCFR 549
Query: 397 VMIAXXXXXXXXXXXXVHEYHYIFWYLYEFLYGWLVSAWDE----LKAWPTRPPRE*KAN 564
M+ VHE+ YI+WY YEFL G+LVSA L A + K
Sbjct: 550 AMLIFLMSGFELELYAVHEFLYIYWYPYEFLIGFLVSALTRTENILLAQEEYAEHQSKTQ 609
Query: 565 VPVYGNRRNARAL-----------YAREGLMCQVMQNMCGGYYKALVAFKLQGKIRQPQS 711
G +N +A Y E + + ++CGG YKA+ A G++R P S
Sbjct: 610 SGGSGAAKNRKAAKPKKNKKTQRPYRAEIVFYHALLSLCGGMYKAMGALTKDGRVRLPLS 669
Query: 712 EFDNEAVRYKHRFAPLS 762
+FDNE +RY RF P +
Sbjct: 670 KFDNEEIRYNRRFLPFA 686
Score = 42.7 bits (96), Expect = 5e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 86 EILRDSIKNFVNPPVLINKPMMPGTPQAREVVETFLTRCV--RPFAVLLQVCGHNRARR 256
+ LR S++ F +PPVL K + P+ ++ +E F C+ F +++CG NRAR+
Sbjct: 431 QFLRHSVQVFNSPPVLNAKHPVAADPKVQQHLENFFRYCINMNTFTQFIRICGFNRARQ 489
>AE013599-3826|AAF47171.1| 784|Drosophila melanogaster CG4065-PA,
isoform A protein.
Length = 784
Score = 93.1 bits (221), Expect = 4e-19
Identities = 65/197 (32%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Frame = +1
Query: 256 RDKLVLLLDEFATLQEEAESVDAITSGSMGT----GDCPC---------FSTWVLYHVLR 396
RDKL L++ F T+Q +A +D++ + G+ P FSTWVLY+ R
Sbjct: 490 RDKLARLIENFDTIQVDAARLDSMMNQLANERAMEGNEPMATALKHSTHFSTWVLYNCFR 549
Query: 397 VMIAXXXXXXXXXXXXVHEYHYIFWYLYEFLYGWLVSAWDE----LKAWPTRPPRE*KAN 564
M+ VHE+ YI+WY YEFL G+LVSA L A + K
Sbjct: 550 AMLIFLMSGFELELYAVHEFLYIYWYPYEFLIGFLVSALTRTENILLAQEEYAEHQSKTQ 609
Query: 565 VPVYGNRRNARAL-----------YAREGLMCQVMQNMCGGYYKALVAFKLQGKIRQPQS 711
G +N +A Y E + + ++CGG YKA+ A G++R P S
Sbjct: 610 SGGSGAAKNRKAAKPKKNKKTQRPYRAEIVFYHALLSLCGGMYKAMGALTKDGRVRLPLS 669
Query: 712 EFDNEAVRYKHRFAPLS 762
+FDNE +RY RF P +
Sbjct: 670 KFDNEEIRYNRRFLPFA 686
Score = 42.7 bits (96), Expect = 5e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 86 EILRDSIKNFVNPPVLINKPMMPGTPQAREVVETFLTRCV--RPFAVLLQVCGHNRARR 256
+ LR S++ F +PPVL K + P+ ++ +E F C+ F +++CG NRAR+
Sbjct: 431 QFLRHSVQVFNSPPVLNAKHPVAADPKVQQHLENFFRYCINMNTFTQFIRICGFNRARQ 489
>AE013599-3825|AAX52681.1| 783|Drosophila melanogaster CG4065-PB,
isoform B protein.
Length = 783
Score = 93.1 bits (221), Expect = 4e-19
Identities = 65/197 (32%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Frame = +1
Query: 256 RDKLVLLLDEFATLQEEAESVDAITSGSMGT----GDCPC---------FSTWVLYHVLR 396
RDKL L++ F T+Q +A +D++ + G+ P FSTWVLY+ R
Sbjct: 489 RDKLARLIENFDTIQVDAARLDSMMNQLANERAMEGNEPMATALKHSTHFSTWVLYNCFR 548
Query: 397 VMIAXXXXXXXXXXXXVHEYHYIFWYLYEFLYGWLVSAWDE----LKAWPTRPPRE*KAN 564
M+ VHE+ YI+WY YEFL G+LVSA L A + K
Sbjct: 549 AMLIFLMSGFELELYAVHEFLYIYWYPYEFLIGFLVSALTRTENILLAQEEYAEHQSKTQ 608
Query: 565 VPVYGNRRNARAL-----------YAREGLMCQVMQNMCGGYYKALVAFKLQGKIRQPQS 711
G +N +A Y E + + ++CGG YKA+ A G++R P S
Sbjct: 609 SGGSGAAKNRKAAKPKKNKKTQRPYRAEIVFYHALLSLCGGMYKAMGALTKDGRVRLPLS 668
Query: 712 EFDNEAVRYKHRFAPLS 762
+FDNE +RY RF P +
Sbjct: 669 KFDNEEIRYNRRFLPFA 685
Score = 42.7 bits (96), Expect = 5e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 86 EILRDSIKNFVNPPVLINKPMMPGTPQAREVVETFLTRCV--RPFAVLLQVCGHNRARR 256
+ LR S++ F +PPVL K + P+ ++ +E F C+ F +++CG NRAR+
Sbjct: 430 QFLRHSVQVFNSPPVLNAKHPVAADPKVQQHLENFFRYCINMNTFTQFIRICGFNRARQ 488
>AY089452-1|AAL90190.1| 708|Drosophila melanogaster AT26759p protein.
Length = 708
Score = 67.7 bits (158), Expect = 2e-11
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Frame = +1
Query: 256 RDKLVLLLDEFATLQEEAESVDAITSGSMGT----GDCPC---------FSTWVLYHVLR 396
RDKL L++ F T+Q +A +D++ + G+ P FSTWVLY+ R
Sbjct: 489 RDKLARLIENFDTIQVDAARLDSMMNQLANERAMEGNEPMATALKHSTHFSTWVLYNCFR 548
Query: 397 VMIAXXXXXXXXXXXXVHEYHYIFWYLYEFLYGWLVSAWDE----LKAWPTRPPRE*KAN 564
M+ VHE+ YI+WY YEFL G+LVSA L A + K
Sbjct: 549 AMLIFLMSGFELELYAVHEFLYIYWYPYEFLIGFLVSALTRTENILLAQEEYAEHQSKTQ 608
Query: 565 VPVYGNRRNARAL-----------YAREGLMCQVMQNMCGGYYKALVAFKLQGKIR 699
G +N +A Y E + + ++CGG YKA+ A G++R
Sbjct: 609 SGGSGAAKNRKAAKPKKNKKTQRPYRAEIVFYHALLSLCGGMYKAMGALTKDGRVR 664
Score = 42.7 bits (96), Expect = 5e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 86 EILRDSIKNFVNPPVLINKPMMPGTPQAREVVETFLTRCV--RPFAVLLQVCGHNRARR 256
+ LR S++ F +PPVL K + P+ ++ +E F C+ F +++CG NRAR+
Sbjct: 430 QFLRHSVQVFNSPPVLNAKHPVAADPKVQQHLENFFRYCINMNTFTQFIRICGFNRARQ 488
>AY118816-1|AAM50676.1| 661|Drosophila melanogaster GH24245p
protein.
Length = 661
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 244 VVSAHLQQHGERTNASRQKSLDNFSRLRSAWHHW 143
+VS+ QH ++T A Q ++++ RLR H+W
Sbjct: 488 LVSSDRYQHFQQTEARLQSAIESLRRLRKHTHYW 521
>AE013599-3405|AAF46854.1| 661|Drosophila melanogaster CG4610-PA
protein.
Length = 661
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 244 VVSAHLQQHGERTNASRQKSLDNFSRLRSAWHHW 143
+VS+ QH ++T A Q ++++ RLR H+W
Sbjct: 488 LVSSDRYQHFQQTEARLQSAIESLRRLRKHTHYW 521
>AF149797-1|AAF03220.2| 450|Drosophila melanogaster Drep4 protein.
Length = 450
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 579 KQKKRTRPLREGGTHVSSHAEHVRGIL*GVSRFQAAREDPSAAVRVRQR 725
+ +K+ R L TH+S AEHV G RF + E + + R R
Sbjct: 162 EHQKQRRVLDNSKTHLSLKAEHVEWFTGGEERFHSKEEAMATRAQTRVR 210
>AE014134-2322|AAF53276.1| 450|Drosophila melanogaster CG9414-PA
protein.
Length = 450
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 579 KQKKRTRPLREGGTHVSSHAEHVRGIL*GVSRFQAAREDPSAAVRVRQR 725
+ +K+ R L TH+S AEHV G RF + E + + R R
Sbjct: 162 EHQKQRRVLDNSKTHLSLKAEHVEWFTGGEERFHSKEEAMATRAQTRVR 210
>AB036773-1|BAA97120.1| 450|Drosophila melanogaster
Caspase-activated DNase protein.
Length = 450
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 579 KQKKRTRPLREGGTHVSSHAEHVRGIL*GVSRFQAAREDPSAAVRVRQR 725
+ +K+ R L TH+S AEHV G RF + E + + R R
Sbjct: 162 EHQKQRRVLDNSKTHLSLKAEHVEWFTGGEERFHSKEEAMATRAQTRVR 210
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,337,624
Number of Sequences: 53049
Number of extensions: 689141
Number of successful extensions: 1691
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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