Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1941
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    26   0.30 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.6  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   8.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.6  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 517 VSMLNGERVFIAHEVATEVGKFAFLILRTEWKAVDVAQN-TSFRILPI 377
           V   N E+  + H++  ++  + +LIL T W  +  +    SF+ L I
Sbjct: 24  VPYYNFEKFSLEHQLWQKIQAWTYLILLTTWTVISASTRIKSFKFLTI 71


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 288 FLARSSQWIAFRSGGRFCEALLL 220
           FL R   W+++  G +  E LLL
Sbjct: 377 FLTRGDLWLSWEEGMKVFEELLL 399


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 567 SNEIRTYQMFTIDFHSEGI 623
           S++ RT+Q F ++  SEGI
Sbjct: 371 SDKQRTHQPFLLNIPSEGI 389


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 81   PIDYTSSLGCVRLVIFCLSSANFL 10
            PIDYTS+    ++V   L   +FL
Sbjct: 978  PIDYTSAFSSEKIVWLHLVYISFL 1001


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +2

Query: 323 PSPENDDRCL 352
           PSP++D++CL
Sbjct: 98  PSPKDDEKCL 107


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 769 LQTKTHYCFTAEIGAAVVPTRADSQDVLPTVITQIITLRVF 647
           +QTK      + +G   +PT  D Q++  T      TLR+F
Sbjct: 18  IQTKVREEILSVVGKEKIPTYNDLQELKYTKRCIKETLRLF 58


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 456 SLHS*SCGQNGKRSTSPKIRHFGSSRSTNGV 364
           S++S SC      + SP+   FGSS   +G+
Sbjct: 28  SMNSMSCVSMPSMNCSPQGASFGSSMLNSGM 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,336
Number of Sequences: 336
Number of extensions: 4401
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)