Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1941
         (798 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.7  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    24   4.7  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.3  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   8.3  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    23   8.3  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   8.3  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = -2

Query: 440 PADRMESGRR--RPKYVISDPPDPLTVFLGTSSTDHRSRGSAC 318
           P D   SG R  +P    + PP P ++   +SS+   S  S C
Sbjct: 769 PPDGSGSGSRCSKPSVTSTTPPTPASLSSSSSSSSSASSTSLC 811


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 775 PTLQTKTHYCFTAEIGAAVVPTRA 704
           P L  K HYC +  I + VV  R+
Sbjct: 64  PKLYAKLHYCVSCAIHSKVVRNRS 87


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 288 FLARSSQWIAFRSGGRFCEALLL 220
           FL R   WI++  G +  E LLL
Sbjct: 364 FLTRGDLWISWEEGMKVFEELLL 386


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 754  HYCFTAEIGAAVVPTRADSQDVLP 683
            H  F AEIG ++V    DS ++LP
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLP 962


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 27  KDRR*PDARNRGKKYSRW 80
           +DRR PDAR+ G  + R+
Sbjct: 632 RDRRYPDARSMGYPFDRF 649


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 14/57 (24%), Positives = 21/57 (36%)
 Frame = -2

Query: 464 SRKVCIPDPADRMESGRRRPKYVISDPPDPLTVFLGTSSTDHRSRGSACKLPHRHSP 294
           S+  C PD  D    G  +  +  +    P  V     S  H S G+ C    + +P
Sbjct: 441 SQDCCGPDRRDCCLRGGEKGHFAATCRLPPRCVLCPDGSNAHHSSGAFCPAAKKTAP 497


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 872,462
Number of Sequences: 2352
Number of extensions: 18774
Number of successful extensions: 81
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)