Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1941
(798 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 25 1.1
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 25 1.1
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 3.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 5.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 5.7
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 7.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 7.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 7.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 7.6
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 7.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 7.6
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 7.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 7.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 7.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 7.6
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -3
Query: 673 TQIITLRVFSFYLLHNVIPSLWKSIVN 593
T +IT+ +FSF ++ +IPS +++ N
Sbjct: 9 THLITVLLFSFVVILLIIPSKCEAVSN 35
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -3
Query: 673 TQIITLRVFSFYLLHNVIPSLWKSIVN 593
T +IT+ +FSF ++ +IPS +++ N
Sbjct: 9 THLITVLLFSFVVILLIIPSKCEAVSN 35
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.0 bits (47), Expect = 3.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 785 QRLPHPANENALLLHGRNRRGGSTYPCGLTGRPTNSNYANYNIAGF 648
Q + P N +ALL H + T GL + YA N+AG+
Sbjct: 190 QNILIPVNYSALLSHDEQQLSYFTQDIGLA-----AYYAQVNLAGY 230
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 288 FLARSSQWIAFRSGGRFCEALLL 220
FL R WI++ G + + LLL
Sbjct: 381 FLTRGDLWISWEEGMKVFDELLL 403
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 761 ENALLLHGRNRRGGSTYPCGLT 696
ENA+LL GR+++ + P G T
Sbjct: 368 ENAMLLSGRSQKSTTGPPPGPT 389
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 5.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 143 KKEGKFEQMENDRSSGTYVLHPSTILLPSVACV 45
K + KFE +E D VL + + +VACV
Sbjct: 527 KNKDKFESVEEDWKYVAMVLDRIFLWIFTVACV 559
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYN 95
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RTERERSREPKIISSLSNNYNYSNYN 95
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYN 95
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYN 95
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYN 95
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYN 95
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYN 95
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYN 95
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 737 RNRRGGSTYPCGLTGRPTNSNYANYN 660
R R S P ++ N NY+NYN
Sbjct: 70 RRERERSKEPKIISSLSNNYNYSNYN 95
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,709
Number of Sequences: 438
Number of extensions: 5327
Number of successful extensions: 27
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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