Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1940
(784 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-961|AAF58878.3| 779|Drosophila melanogaster CG1513-PA ... 138 8e-33
BT003800-1|AAO41483.1| 625|Drosophila melanogaster AT23163p pro... 73 6e-13
AE014297-2779|AAN13827.1| 625|Drosophila melanogaster CG5077-PD... 73 6e-13
AE014297-2776|AAG22160.2| 816|Drosophila melanogaster CG5077-PA... 73 6e-13
AY051614-1|AAK93038.1| 798|Drosophila melanogaster GH25973p pro... 69 1e-11
AE014297-2778|AAN13826.3| 800|Drosophila melanogaster CG5077-PC... 69 1e-11
AE014297-2777|AAN13825.2| 799|Drosophila melanogaster CG5077-PB... 69 1e-11
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 33 0.33
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 33 0.33
AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p pro... 33 0.33
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 31 1.8
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 31 2.3
AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long i... 29 9.5
AF520714-1|AAM55243.1| 3002|Drosophila melanogaster MICAL medium... 29 9.5
AF520713-1|AAM55242.1| 2734|Drosophila melanogaster MICAL short ... 29 9.5
AE014297-1071|AAO41537.1| 4723|Drosophila melanogaster CG33208-P... 29 9.5
AE014297-1070|AAO41536.1| 4723|Drosophila melanogaster CG33208-P... 29 9.5
AE014297-1069|AAO41535.1| 4723|Drosophila melanogaster CG33208-P... 29 9.5
AE014297-1068|AAO41534.1| 4723|Drosophila melanogaster CG33208-P... 29 9.5
AE014297-1067|AAO41533.1| 4723|Drosophila melanogaster CG33208-P... 29 9.5
AE014297-1066|AAO41532.1| 3002|Drosophila melanogaster CG33208-P... 29 9.5
AE014297-1065|AAO41531.1| 2734|Drosophila melanogaster CG33208-P... 29 9.5
>AE013599-961|AAF58878.3| 779|Drosophila melanogaster CG1513-PA
protein.
Length = 779
Score = 138 bits (334), Expect = 8e-33
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 510 YEDESDSDLGSMENHGSVVTHLLSQVKIGMDLTKVVLPTFILERRSLLEMYADSFAHPDQ 689
YE+E ++DL SME HGS++THLLSQVKIGMDLTKVVLPTFILERRSLLEMYAD FAHPD
Sbjct: 397 YEEEEETDL-SMEAHGSMITHLLSQVKIGMDLTKVVLPTFILERRSLLEMYADYFAHPDL 455
Query: 690 FIKIVELPTPRERMVQVIRWYLSSF 764
FIKI +L PR+R+VQV RWY+S++
Sbjct: 456 FIKISDLDDPRDRIVQVCRWYMSAY 480
>BT003800-1|AAO41483.1| 625|Drosophila melanogaster AT23163p
protein.
Length = 625
Score = 72.5 bits (170), Expect = 6e-13
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +3
Query: 546 ENHGSVVTHLLSQVKIGMDLTKVVLPTFILERRSLLEMYADSFAHPDQFIKIVELPTPRE 725
E + S++ ++ QV+ GMDL+KVVLPTFILE RS L+ +DS+ H D K V+
Sbjct: 100 EENKSLIWCIVKQVRPGMDLSKVVLPTFILEPRSFLDKLSDSYYHADLLSKAVQEDDAFT 159
Query: 726 RMVQVIRWYLSSF 764
RM V++WYLSSF
Sbjct: 160 RMKLVVQWYLSSF 172
>AE014297-2779|AAN13827.1| 625|Drosophila melanogaster CG5077-PD,
isoform D protein.
Length = 625
Score = 72.5 bits (170), Expect = 6e-13
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +3
Query: 546 ENHGSVVTHLLSQVKIGMDLTKVVLPTFILERRSLLEMYADSFAHPDQFIKIVELPTPRE 725
E + S++ ++ QV+ GMDL+KVVLPTFILE RS L+ +DS+ H D K V+
Sbjct: 100 EENKSLIWCIVKQVRPGMDLSKVVLPTFILEPRSFLDKLSDSYYHADLLSKAVQEDDAFT 159
Query: 726 RMVQVIRWYLSSF 764
RM V++WYLSSF
Sbjct: 160 RMKLVVQWYLSSF 172
>AE014297-2776|AAG22160.2| 816|Drosophila melanogaster CG5077-PA,
isoform A protein.
Length = 816
Score = 72.5 bits (170), Expect = 6e-13
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +3
Query: 546 ENHGSVVTHLLSQVKIGMDLTKVVLPTFILERRSLLEMYADSFAHPDQFIKIVELPTPRE 725
E + S++ ++ QV+ GMDL+KVVLPTFILE RS L+ +DS+ H D K V+
Sbjct: 291 EENKSLIWCIVKQVRPGMDLSKVVLPTFILEPRSFLDKLSDSYYHADLLSKAVQEDDAFT 350
Query: 726 RMVQVIRWYLSSF 764
RM V++WYLSSF
Sbjct: 351 RMKLVVQWYLSSF 363
>AY051614-1|AAK93038.1| 798|Drosophila melanogaster GH25973p
protein.
Length = 798
Score = 68.5 bits (160), Expect = 1e-11
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = +3
Query: 582 QVKIGMDLTKVVLPTFILERRSLLEMYADSFAHPDQFIKIVELPTPRERMVQVIRWYLSS 761
QV+ GMDL+KVVLPTFILE RS L+ +DS+ H D K V+ RM V++WYLSS
Sbjct: 285 QVRPGMDLSKVVLPTFILEPRSFLDKLSDSYYHADLLSKAVQEDDAFTRMKLVVQWYLSS 344
Query: 762 F 764
F
Sbjct: 345 F 345
>AE014297-2778|AAN13826.3| 800|Drosophila melanogaster CG5077-PC,
isoform C protein.
Length = 800
Score = 68.5 bits (160), Expect = 1e-11
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = +3
Query: 582 QVKIGMDLTKVVLPTFILERRSLLEMYADSFAHPDQFIKIVELPTPRERMVQVIRWYLSS 761
QV+ GMDL+KVVLPTFILE RS L+ +DS+ H D K V+ RM V++WYLSS
Sbjct: 287 QVRPGMDLSKVVLPTFILEPRSFLDKLSDSYYHADLLSKAVQEDDAFTRMKLVVQWYLSS 346
Query: 762 F 764
F
Sbjct: 347 F 347
>AE014297-2777|AAN13825.2| 799|Drosophila melanogaster CG5077-PB,
isoform B protein.
Length = 799
Score = 68.5 bits (160), Expect = 1e-11
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = +3
Query: 582 QVKIGMDLTKVVLPTFILERRSLLEMYADSFAHPDQFIKIVELPTPRERMVQVIRWYLSS 761
QV+ GMDL+KVVLPTFILE RS L+ +DS+ H D K V+ RM V++WYLSS
Sbjct: 286 QVRPGMDLSKVVLPTFILEPRSFLDKLSDSYYHADLLSKAVQEDDAFTRMKLVVQWYLSS 345
Query: 762 F 764
F
Sbjct: 346 F 346
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 33.5 bits (73), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 362 GSQHNELLITNISQYYKFITITSSAHHH 279
G+++ +IT++ +Y K ITS+AHHH
Sbjct: 1033 GTEYKNSIITDLCKYLKIKNITSTAHHH 1060
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 33.5 bits (73), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 362 GSQHNELLITNISQYYKFITITSSAHHH 279
G+++ +IT++ +Y K ITS+AHHH
Sbjct: 796 GTEYKNSIITDLCKYLKIKNITSTAHHH 823
>AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p
protein.
Length = 320
Score = 33.5 bits (73), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 362 GSQHNELLITNISQYYKFITITSSAHHH 279
G+++ +IT++ +Y K ITS+AHHH
Sbjct: 184 GTEYKNSIITDLCKYLKIKNITSTAHHH 211
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 31.1 bits (67), Expect = 1.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 362 GSQHNELLITNISQYYKFITITSSAHHH 279
G+++ +I ++ +Y K ITS+AHHH
Sbjct: 420 GTEYKNQIIDDLCKYMKIKNITSTAHHH 447
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 365 QGSQHNELLITNISQYYKFITITSSAHHH 279
QG+++ L+ + +Y +TSSAHHH
Sbjct: 790 QGTEYKNSLMNELCKYMHIENLTSSAHHH 818
>AF520715-1|AAM55244.1| 4723|Drosophila melanogaster MICAL long
isoform protein.
Length = 4723
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 467 STVAAAPSLARACPPPDDSCNAFA-----VPSQRPSPRCQGSQHNELLITNISQYYKFIT 303
S+++ P LA AC P D +C++ A + P P + T +S Y
Sbjct: 4095 SSLSPTPKLAAACSPQDSNCSSQAHYHASTAEEAPKPPAERPLQKSATSTYVSPYRTVQA 4154
Query: 302 ITSSA 288
T SA
Sbjct: 4155 PTRSA 4159
>AF520714-1|AAM55243.1| 3002|Drosophila melanogaster MICAL medium
isoform protein.
Length = 3002
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 467 STVAAAPSLARACPPPDDSCNAFA-----VPSQRPSPRCQGSQHNELLITNISQYYKFIT 303
S+++ P LA AC P D +C++ A + P P + T +S Y
Sbjct: 2374 SSLSPTPKLAAACSPQDSNCSSQAHYHASTAEEAPKPPAERPLQKSATSTYVSPYRTVQA 2433
Query: 302 ITSSA 288
T SA
Sbjct: 2434 PTRSA 2438
>AF520713-1|AAM55242.1| 2734|Drosophila melanogaster MICAL short
isoform protein.
Length = 2734
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 467 STVAAAPSLARACPPPDDSCNAFA-----VPSQRPSPRCQGSQHNELLITNISQYYKFIT 303
S+++ P LA AC P D +C++ A + P P + T +S Y
Sbjct: 2106 SSLSPTPKLAAACSPQDSNCSSQAHYHASTAEEAPKPPAERPLQKSATSTYVSPYRTVQA 2165
Query: 302 ITSSA 288
T SA
Sbjct: 2166 PTRSA 2170
>AE014297-1071|AAO41537.1| 4723|Drosophila melanogaster CG33208-PH,
isoform H protein.
Length = 4723
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 467 STVAAAPSLARACPPPDDSCNAFA-----VPSQRPSPRCQGSQHNELLITNISQYYKFIT 303
S+++ P LA AC P D +C++ A + P P + T +S Y
Sbjct: 4095 SSLSPTPKLAAACSPQDSNCSSQAHYHASTAEEAPKPPAERPLQKSATSTYVSPYRTVQA 4154
Query: 302 ITSSA 288
T SA
Sbjct: 4155 PTRSA 4159
>AE014297-1070|AAO41536.1| 4723|Drosophila melanogaster CG33208-PG,
isoform G protein.
Length = 4723
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 467 STVAAAPSLARACPPPDDSCNAFA-----VPSQRPSPRCQGSQHNELLITNISQYYKFIT 303
S+++ P LA AC P D +C++ A + P P + T +S Y
Sbjct: 4095 SSLSPTPKLAAACSPQDSNCSSQAHYHASTAEEAPKPPAERPLQKSATSTYVSPYRTVQA 4154
Query: 302 ITSSA 288
T SA
Sbjct: 4155 PTRSA 4159
>AE014297-1069|AAO41535.1| 4723|Drosophila melanogaster CG33208-PF,
isoform F protein.
Length = 4723
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 467 STVAAAPSLARACPPPDDSCNAFA-----VPSQRPSPRCQGSQHNELLITNISQYYKFIT 303
S+++ P LA AC P D +C++ A + P P + T +S Y
Sbjct: 4095 SSLSPTPKLAAACSPQDSNCSSQAHYHASTAEEAPKPPAERPLQKSATSTYVSPYRTVQA 4154
Query: 302 ITSSA 288
T SA
Sbjct: 4155 PTRSA 4159
>AE014297-1068|AAO41534.1| 4723|Drosophila melanogaster CG33208-PD,
isoform D protein.
Length = 4723
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 467 STVAAAPSLARACPPPDDSCNAFA-----VPSQRPSPRCQGSQHNELLITNISQYYKFIT 303
S+++ P LA AC P D +C++ A + P P + T +S Y
Sbjct: 4095 SSLSPTPKLAAACSPQDSNCSSQAHYHASTAEEAPKPPAERPLQKSATSTYVSPYRTVQA 4154
Query: 302 ITSSA 288
T SA
Sbjct: 4155 PTRSA 4159
>AE014297-1067|AAO41533.1| 4723|Drosophila melanogaster CG33208-PC,
isoform C protein.
Length = 4723
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 467 STVAAAPSLARACPPPDDSCNAFA-----VPSQRPSPRCQGSQHNELLITNISQYYKFIT 303
S+++ P LA AC P D +C++ A + P P + T +S Y
Sbjct: 4095 SSLSPTPKLAAACSPQDSNCSSQAHYHASTAEEAPKPPAERPLQKSATSTYVSPYRTVQA 4154
Query: 302 ITSSA 288
T SA
Sbjct: 4155 PTRSA 4159
>AE014297-1066|AAO41532.1| 3002|Drosophila melanogaster CG33208-PB,
isoform B protein.
Length = 3002
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 467 STVAAAPSLARACPPPDDSCNAFA-----VPSQRPSPRCQGSQHNELLITNISQYYKFIT 303
S+++ P LA AC P D +C++ A + P P + T +S Y
Sbjct: 2374 SSLSPTPKLAAACSPQDSNCSSQAHYHASTAEEAPKPPAERPLQKSATSTYVSPYRTVQA 2433
Query: 302 ITSSA 288
T SA
Sbjct: 2434 PTRSA 2438
>AE014297-1065|AAO41531.1| 2734|Drosophila melanogaster CG33208-PE,
isoform E protein.
Length = 2734
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 467 STVAAAPSLARACPPPDDSCNAFA-----VPSQRPSPRCQGSQHNELLITNISQYYKFIT 303
S+++ P LA AC P D +C++ A + P P + T +S Y
Sbjct: 2106 SSLSPTPKLAAACSPQDSNCSSQAHYHASTAEEAPKPPAERPLQKSATSTYVSPYRTVQA 2165
Query: 302 ITSSA 288
T SA
Sbjct: 2166 PTRSA 2170
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,692,225
Number of Sequences: 53049
Number of extensions: 704409
Number of successful extensions: 2088
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2082
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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