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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1937
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    70   2e-12
Z68880-6|CAA93092.1|  308|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical pr...    52   4e-07
AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical ...    51   1e-06
U41028-2|AAA82355.1|  233|Caenorhabditis elegans Tetraspanin fam...    50   1e-06
AF039043-9|AAB94196.1|  427|Caenorhabditis elegans Tetraspanin f...    50   2e-06
AF039043-8|AAL02514.1|  451|Caenorhabditis elegans Tetraspanin f...    50   2e-06
U41545-5|AAK39137.2|  243|Caenorhabditis elegans Tetraspanin fam...    47   2e-05
U28740-6|AAA68322.4|  317|Caenorhabditis elegans Tetraspanin fam...    44   9e-05
AL110487-3|CAB54426.1|  223|Caenorhabditis elegans Hypothetical ...    40   0.002
Z78415-6|CAH60758.1|  291|Caenorhabditis elegans Hypothetical pr...    38   0.011
Z73971-4|CAA98254.1|  205|Caenorhabditis elegans Hypothetical pr...    38   0.011
L14745-7|AAK71354.1|  234|Caenorhabditis elegans Tetraspanin fam...    35   0.057
AL021487-1|CAA16352.4|  241|Caenorhabditis elegans Hypothetical ...    34   0.10 
L14745-8|AAA27923.1|  244|Caenorhabditis elegans Tetraspanin fam...    34   0.13 
Z92824-4|CAB07307.2|  395|Caenorhabditis elegans B0413.2 protein.      33   0.18 
Z73908-1|CAA98130.2|  230|Caenorhabditis elegans Hypothetical pr...    31   0.71 
Z68319-5|CAA92703.1|  261|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z81086-1|CAB03120.2|  258|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z83220-4|CAC42264.1|  617|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z66521-7|CAA91401.2|  387|Caenorhabditis elegans Hypothetical pr...    29   5.0  
X98132-1|CAA66831.1|  387|Caenorhabditis elegans N-acetyllactosa...    29   5.0  
AF068709-1|AAQ91906.1|  449|Caenorhabditis elegans Hypothetical ...    29   5.0  
L17337-5|ABM74562.1|  306|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U00052-11|AAK21425.2|  514|Caenorhabditis elegans Hypothetical p...    28   8.7  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 26/85 (30%), Positives = 45/85 (52%)
 Frame = +2

Query: 251 CFIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASI 430
           C ++ F GCCGA++EN+C+ ++F+V L ++   E+A  I GY  H      +   L   +
Sbjct: 63  CTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGM 122

Query: 431 TQYPVDKNVQKTIDIIQTDLQCCGI 505
            +Y   + V+   D      +CCG+
Sbjct: 123 VRYHESRGVESAWDKTHQLFECCGV 147



 Score = 35.9 bits (79), Expect = 0.033
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = +3

Query: 66  LEGGMSCVKYLMFCFNLLFAITGLIILIVG 155
           +EGG++ VKYL+F  NL+  + GL ++IVG
Sbjct: 2   VEGGVTIVKYLLFLANLVLWVGGLSLIIVG 31


>Z68880-6|CAA93092.1|  308|Caenorhabditis elegans Hypothetical
           protein T14G10.6 protein.
          Length = 308

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 28/85 (32%), Positives = 46/85 (54%)
 Frame = +2

Query: 254 FIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASIT 433
           FI+ F GC G+++EN   +  +S  L ++ +AE + G+  Y     L++ +   LN  + 
Sbjct: 96  FIIGFSGCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNYIRNLLNDVVV 155

Query: 434 QYPVDKNVQKTIDIIQTDLQCCGIN 508
            Y  D ++Q  ID +Q    CCGIN
Sbjct: 156 GYRDDPDLQLLIDSMQETWMCCGIN 180



 Score = 36.7 bits (81), Expect = 0.019
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 84  CVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMN 191
           CVKY +F FN++F + G  +L+ G+ A+I    ++N
Sbjct: 37  CVKYSVFSFNVIFFLLGFGLLLFGVWAQIEKNTFVN 72


>Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical
           protein F33C8.3 protein.
          Length = 282

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +2

Query: 257 IVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASI-T 433
           +V +FGC GA K N C +  F   L++ F  ELA  +  + K   ++  V  ++  +I  
Sbjct: 69  LVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRN 128

Query: 434 QYPVDKNVQKTIDIIQTDLQCCGI 505
           +Y  +   +   D +Q   +CCG+
Sbjct: 129 RYSSETAFKDAFDTVQEKFECCGV 152


>AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical
           protein Y39B6A.6 protein.
          Length = 321

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
 Frame = +2

Query: 257 IVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQ 436
           +VA  GCCG    +   +I +S+ + ++ VA L+ GI    K   L+  +   LN  +  
Sbjct: 126 VVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVELSDALNYMVQH 185

Query: 437 YPVDKN-VQKTIDIIQTDLQCCG 502
           Y      VQ+++D +QT  +CCG
Sbjct: 186 YYQGPGVVQESLDHLQTAFRCCG 208


>U41028-2|AAA82355.1|  233|Caenorhabditis elegans Tetraspanin family
           protein 9 protein.
          Length = 233

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 26/83 (31%), Positives = 40/83 (48%)
 Frame = +2

Query: 254 FIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASIT 433
           F+V FFGCCGA  E+  ++  F   ++I+   EL   +       +   S+ + L  S  
Sbjct: 79  FLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSSIQQVLKKSSA 138

Query: 434 QYPVDKNVQKTIDIIQTDLQCCG 502
            Y + KN++     IQ   QCCG
Sbjct: 139 TYELRKNIKP----IQNVFQCCG 157


>AF039043-9|AAB94196.1|  427|Caenorhabditis elegans Tetraspanin
           family protein 14,isoform a protein.
          Length = 427

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 22/87 (25%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = +2

Query: 257 IVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY-MKHTDLEDSVMRN--LNAS 427
           +V+FFG  GA+++N  ++  F+  + + ++  +AV +  + + +TD  + +  N  L  +
Sbjct: 85  VVSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYA 144

Query: 428 ITQYPVDKNVQKTIDIIQTDLQCCGIN 508
           +  Y  ++N+ + +D +Q +L+CCG++
Sbjct: 145 VKNYHTNRNLAEIMDALQENLECCGVS 171


>AF039043-8|AAL02514.1|  451|Caenorhabditis elegans Tetraspanin
           family protein 14,isoform b protein.
          Length = 451

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 22/87 (25%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = +2

Query: 257 IVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY-MKHTDLEDSVMRN--LNAS 427
           +V+FFG  GA+++N  ++  F+  + + ++  +AV +  + + +TD  + +  N  L  +
Sbjct: 109 VVSFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYA 168

Query: 428 ITQYPVDKNVQKTIDIIQTDLQCCGIN 508
           +  Y  ++N+ + +D +Q +L+CCG++
Sbjct: 169 VKNYHTNRNLAEIMDALQENLECCGVS 195


>U41545-5|AAK39137.2|  243|Caenorhabditis elegans Tetraspanin family
           protein 17 protein.
          Length = 243

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
 Frame = +2

Query: 257 IVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASI-- 430
           +V F G CGAV  +  +++ F +FL+  F+A++A+G    + + D   SV  N+   +  
Sbjct: 39  LVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLS-LFYKDKVYSVKENVREIVKS 97

Query: 431 -----TQYPVDKNVQKTIDIIQTDLQCCGINVRPTGPIT 532
                T  P +K V + ID +Q   +CCG ++ PT  I+
Sbjct: 98  KYGVMTSEPENKMVTEFIDKLQFYEKCCG-SLGPTDYIS 135


>U28740-6|AAA68322.4|  317|Caenorhabditis elegans Tetraspanin family
           protein 11 protein.
          Length = 317

 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
 Frame = +2

Query: 257 IVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY----MKHTDLEDSVMRNL-- 418
           +VAF GCCGA KE   ++  +S  L++I   ++A  I  +    M   D  D +  +L  
Sbjct: 95  VVAFLGCCGAAKEWRPLLCCYSSCLMLILAIQIAATIYAFLHSHMFENDFRDILHSSLKM 154

Query: 419 -----NASITQYPVDKNVQKTI-DIIQTDLQCCGIN 508
                N  ++  P D  + KT  D I  +  CCG++
Sbjct: 155 YNGTDNMKVSNNPQDGLLVKTAWDKIMIEKSCCGVD 190



 Score = 33.1 bits (72), Expect = 0.23
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 57  TMALEGGMSCVKYLMFCFNLLFAITGLIILIVGIRAEINSYPYMN 191
           TM L      +K+ +F FNL+F + GLI L +G+   ++ Y   N
Sbjct: 8   TMPLSCTARALKFSLFIFNLVFLLCGLICLGIGLWLVLDKYAIDN 52


>AL110487-3|CAB54426.1|  223|Caenorhabditis elegans Hypothetical
           protein Y39E4B.4 protein.
          Length = 223

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 23/87 (26%), Positives = 40/87 (45%)
 Frame = +2

Query: 257 IVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQ 436
           I+ F G  GAV  +  ++  + +F++I+F+ E+A+GI   +K   +  +V   +  S   
Sbjct: 83  IIGFVGVIGAVIRSKYLLAPYFLFMVILFLLEIAIGITVLVKRRSVRRTVKEYVFDSF-- 140

Query: 437 YPVDKNVQKTIDIIQTDLQCCGINVRP 517
              + N Q  I        CCG    P
Sbjct: 141 ---NMNAQADISAFNFRYNCCGAENLP 164


>Z78415-6|CAH60758.1|  291|Caenorhabditis elegans Hypothetical
           protein C17G1.8 protein.
          Length = 291

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
 Frame = +2

Query: 254 FIVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTD----LEDSVMRNLN 421
           FI+   G  G    N  ++ ++  F++++ +      I G +   +    L  S++ N+N
Sbjct: 60  FIIVAVGYLGVSWSNKSLLYSYIGFVILLILVHGIARITGSLHKEEAKENLRKSMLHNIN 119

Query: 422 --ASITQYPVDKNVQKTIDIIQTDLQCCGIN 508
             A +T+   +  +  T D +Q +LQCCG++
Sbjct: 120 TTAVVTKIGREIKLSLTWDHLQRELQCCGVD 150


>Z73971-4|CAA98254.1|  205|Caenorhabditis elegans Hypothetical
           protein C50H2.6 protein.
          Length = 205

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +1

Query: 538 PIPSTCCSAQEINDGVVAACTENSTNFHSKGCLTKLV 648
           P+P+T CSA  I++  V +C   ST  H+K  L+K V
Sbjct: 96  PLPATFCSAASIDNNAVKSCKNKSTTLHAKILLSKEV 132


>L14745-7|AAK71354.1|  234|Caenorhabditis elegans Tetraspanin family
           protein 2 protein.
          Length = 234

 Score = 35.1 bits (77), Expect = 0.057
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
 Frame = +2

Query: 260 VAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLN-ASITQ 436
           ++  G  GA+ +   ++ T  V ++I F+ EL   IA + K   L   + R  N   +T 
Sbjct: 84  LSIIGLIGAISQKKPVLATCLVLIVIFFIMELGGSIALWSKRGSLRSLLYRFANDIYLTN 143

Query: 437 YPVDKNVQKTIDIIQTDLQCCGI 505
              D      I IIQ    CCG+
Sbjct: 144 SVFD------ISIIQNTYNCCGV 160


>AL021487-1|CAA16352.4|  241|Caenorhabditis elegans Hypothetical
           protein Y45F10B.1 protein.
          Length = 241

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +2

Query: 251 CFIV-AFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTD--LEDSVMRNLN 421
           C +V  F GC      +   +    V + I+FV ++ V I  ++ + D    + V    +
Sbjct: 74  CMVVLGFCGCFAVGFGSKTALSVHLVLVFIVFVVKI-VAIVMFLANNDHLRREFVGVYRD 132

Query: 422 ASITQYPVDKNVQKTIDIIQTDLQCCGIN 508
             +  Y  +   + T+D + T L+CCG N
Sbjct: 133 ELVANYHNNSRTKNTLDWVHTSLKCCGAN 161


>L14745-8|AAA27923.1|  244|Caenorhabditis elegans Tetraspanin family
           protein 1 protein.
          Length = 244

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
 Frame = +2

Query: 308 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTD 487
           +IT+ V ++++   E+  G+A  ++   L D+    ++A  T      N    + IIQ  
Sbjct: 101 MITYLVLIIVLVSLEIGCGVAVLVRRNSLHDNTNSLIDAMYT-----TNSVNDLKIIQDK 155

Query: 488 LQCCGI-----NVRPTGPIT 532
             CCGI     NV   GP++
Sbjct: 156 YNCCGIENSLFNVMYCGPMS 175


>Z92824-4|CAB07307.2|  395|Caenorhabditis elegans B0413.2 protein.
          Length = 395

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 257 IVAFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGI 367
           +VA  GCCG    +   +I +S+ + ++ VA L+ GI
Sbjct: 237 VVAMXGCCGITGRSRPFLIIYSMVVFLLLVATLSCGI 273


>Z73908-1|CAA98130.2|  230|Caenorhabditis elegans Hypothetical
           protein F53B2.2 protein.
          Length = 230

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
 Frame = +2

Query: 251 CFIV-AFFGCCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTD--LEDSVMRNLN 421
           C +V    GC      +   +    V + ++FV ++ V I  ++ + D    + V    +
Sbjct: 63  CMVVLGLCGCFAVCFGSKTALSVHLVLVFLVFVVKI-VAIVMFLANKDHLRREFVGVYRD 121

Query: 422 ASITQYPVDKNVQKTIDIIQTDLQCCGIN 508
             +  Y  +   + T+D + T L+CCG N
Sbjct: 122 ELVANYHNNSRTKNTLDWVHTSLKCCGAN 150


>Z68319-5|CAA92703.1|  261|Caenorhabditis elegans Hypothetical
           protein T23G7.5a protein.
          Length = 261

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 499 RYKRPADWADHGLPIPSTCCSAQEIND 579
           RY +  +WADHG+      C   E+N+
Sbjct: 122 RYYKKTEWADHGVKYLKLNCPGHEVNE 148


>Z81086-1|CAB03120.2|  258|Caenorhabditis elegans Hypothetical
           protein F53B6.1 protein.
          Length = 258

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
 Frame = +2

Query: 257 IVAFFGCCGAV-KENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLN--AS 427
           I+ +  C  A+ KE  C + + +V  ++I V  +  G  G      L      NL    S
Sbjct: 72  ILNYLICFYAIFKEMRCFVTSCAVASIVIAVMLIIGGCIGLNFRDQLTHYTPLNLKMLTS 131

Query: 428 ITQ-YPVD--KNVQKTIDIIQTDLQCCGIN 508
           + + Y     K + ++ D +Q++ +CCG+N
Sbjct: 132 LRELYGTHDMKGITESWDALQSNFKCCGVN 161


>Z83220-4|CAC42264.1|  617|Caenorhabditis elegans Hypothetical
           protein C34B7.4 protein.
          Length = 617

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 499 RYKRPADWADHGLPIPSTCCSAQEINDGVVAACTENSTNFHSKGCL 636
           R +R     +  LP+ S C   Q+ +D  +  C+E    +H + CL
Sbjct: 78  RRRRTLKHGEVALPVCSFCKEDQKADDEPLKECSECKAKYHIRKCL 123


>Z66521-7|CAA91401.2|  387|Caenorhabditis elegans Hypothetical
           protein W02B12.11 protein.
          Length = 387

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +2

Query: 287 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY-PVDKNVQK 463
           ++ +HC+I +FS   LIIFVA   +     ++++ L D   R + A+  Q   V+ NVQ+
Sbjct: 1   MRTSHCIIRSFSPKRLIIFVAASTLIYVMLLRNSTLNDE--RRIAATEEQVRSVNVNVQQ 58

Query: 464 T 466
           +
Sbjct: 59  S 59


>X98132-1|CAA66831.1|  387|Caenorhabditis elegans
           N-acetyllactosamine synthase protein.
          Length = 387

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +2

Query: 287 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY-PVDKNVQK 463
           ++ +HC+I +FS   LIIFVA   +     ++++ L D   R + A+  Q   V+ NVQ+
Sbjct: 1   MRTSHCIIRSFSPKRLIIFVAASTLIYVMLLRNSTLNDE--RRIAATEEQVRSVNVNVQQ 58

Query: 464 T 466
           +
Sbjct: 59  S 59


>AF068709-1|AAQ91906.1|  449|Caenorhabditis elegans Hypothetical
           protein C24B9.3b protein.
          Length = 449

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 779 NLNCFIWLRMERARQHANITP 717
           N +CF WL   RA+Q  N TP
Sbjct: 18  NGDCFYWLHASRAQQFPNYTP 38


>L17337-5|ABM74562.1|  306|Caenorhabditis elegans Hypothetical
           protein ZK686.6 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 669 YGARRRWSRYRFGSAPRCDIRMLPRSFHSQ 758
           Y  R R SR +  S+P+C I  LP+ F  Q
Sbjct: 7   YEKRERSSRIQKCSSPQCCINRLPKKFQDQ 36


>U00052-11|AAK21425.2|  514|Caenorhabditis elegans Hypothetical
           protein K02F3.1 protein.
          Length = 514

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -2

Query: 511 DVYTAALQVCLYDINSLLDVLVYRILSNGSVQVAHNRIFQVRMLHVTSD 365
           D +  A +   + + ++L+   + + +   VQ+AH    Q+R LHV  D
Sbjct: 208 DSFIQAPEASSFALQTVLENWTFPLQNEQIVQLAHANTLQMRALHVKGD 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,622,763
Number of Sequences: 27780
Number of extensions: 361446
Number of successful extensions: 1231
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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