Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1936
         (783 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UCX4 Cluster: Cytochrome reductase, putative; n=1; Th...    34   4.6  
UniRef50_A2G5L4 Cluster: Putative uncharacterized protein; n=1; ...    34   4.6  
UniRef50_Q1DR12 Cluster: Predicted protein; n=2; Coccidioides im...    33   6.1  
UniRef50_Q6BKY1 Cluster: Similarities with CA3389|IPF6754 Candid...    33   8.1  

>UniRef50_Q4UCX4 Cluster: Cytochrome reductase, putative; n=1;
           Theileria annulata|Rep: Cytochrome reductase, putative -
           Theileria annulata
          Length = 647

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
 Frame = +1

Query: 298 VYKERTTDALLYIYVCKLIDSYLHSSIEQ---FSXXXXXXXXXXXXPLISRFECSQTLRY 468
           +YK   ++ L  + V   I  ++ SSI     F+            PL    +  Q+  Y
Sbjct: 471 IYKGNCSNYLCNLIVGDTIKFFIRSSIFSNINFNNNFLLIANGTGTPLRCLQQQLQSPIY 530

Query: 469 TITSDHLIIIIFYKPSLYTLFNGAHLILWQNGIF 570
           TITS  +I ++ YK +L+ L      I +QN IF
Sbjct: 531 TITSSLVIYLVIYKENLFLLTRSILNIYFQNPIF 564


>UniRef50_A2G5L4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1207

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 21/72 (29%), Positives = 39/72 (54%)
 Frame = +2

Query: 278 DAVLSCKSIKNVQRMHFYIYMCVNLSIRIYILQSNNSVNNTLE*ELLKLFHSLAVLNVRK 457
           D +LS + ++N+Q + F    C  L+IR+  L+++N +N+    +L K F ++    + +
Sbjct: 37  DCILSFEPLENLQALQFLRAWCRKLAIRVK-LENDNRINHQNSSDLSKSFKNM----IER 91

Query: 458 HYVTQLQATISL 493
              T    TISL
Sbjct: 92  FTTTYANLTISL 103


>UniRef50_Q1DR12 Cluster: Predicted protein; n=2; Coccidioides
           immitis|Rep: Predicted protein - Coccidioides immitis
          Length = 581

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = +2

Query: 305 KNVQRMHFYIYMCVNLSIRIYILQSNNSVNNTLE*ELLKLFHSLAVLNVRKHYVTQLQAT 484
           + +  MH+Y  MC++L    Y+L S N     L    + L  SL V N +++ + +++  
Sbjct: 423 ETIDVMHYYAAMCIHLIPLFYMLLSLNVCVRVL--STVNLQQSLLVPNPQRYLLYKIKKL 480

Query: 485 ISLLLFFTNHRCTLCS 532
           +SL L    H   +CS
Sbjct: 481 LSLPLSMQQH--PICS 494


>UniRef50_Q6BKY1 Cluster: Similarities with CA3389|IPF6754 Candida
           albicans IPF6754; n=5; Saccharomycetales|Rep:
           Similarities with CA3389|IPF6754 Candida albicans
           IPF6754 - Debaryomyces hansenii (Yeast) (Torulaspora
           hansenii)
          Length = 189

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = +2

Query: 329 YIYMCVNLSIRIYILQSNNSVNNTLE*ELLKLFHSLAVLNVRKHYVTQLQATI----SLL 496
           + +      I+ ++ +SNN +NN     ++ +  SL   N+   Y   L +T+    + L
Sbjct: 46  FFFQITRTMIQKHLTKSNNMLNNYCWLTMIHISKSLRRFNIP--YTRALSSTLRNSKTSL 103

Query: 497 LFFTNHRCTLCSTAR 541
            FFT   C LC+ A+
Sbjct: 104 TFFTKETCMLCTNAK 118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,533,371
Number of Sequences: 1657284
Number of extensions: 13069033
Number of successful extensions: 25828
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25815
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)