Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1935
         (789 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    28   0.38 
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    28   0.38 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   2.7  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    24   4.7  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   8.1  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   8.1  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 211 STLAPTR*RSSSCTRLPGPLQLQYVPSL 294
           S++A T   S SC+ LPG  ++ YVP L
Sbjct: 409 SSIAFTANTSISCSCLPGCFEISYVPDL 436


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 211 STLAPTR*RSSSCTRLPGPLQLQYVPSL 294
           S++A T   S SC+ LPG  ++ YVP L
Sbjct: 409 SSIAFTANTSISCSCLPGCFEISYVPDL 436


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 441 RLSTTGRSHTRSARD-TTSHLL*AVTATPP-PLSTS 340
           R   T   H  + R  TT+H L A T+TPP P +TS
Sbjct: 308 RTPATSTEHRYTTRTPTTTHRLAARTSTPPDPETTS 343


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
 Frame = +2

Query: 374 AYSKWEVVSRA---LRVCE---RPVVLNRASSTNTTNPFGSTFC 487
           AY +++V+  A   + VCE    P  +   ++T TT P  +T C
Sbjct: 269 AYYEYDVLQAAAAKMTVCEVAVEPPAMTTTTTTTTTTPTTATAC 312


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 535 ASITLYQPDNARPHYA 582
           ASITL+  D  R HYA
Sbjct: 190 ASITLFPSDICRSHYA 205


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 444 ARLSTTGRSHTRSARDTTSHLL*AVTATPPPLSTSE 337
           A  STT  + T +   TT+      T TP P+  S+
Sbjct: 142 ATTSTTSTTATTTTTTTTTTTTTTTTTTPNPVGESD 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,859
Number of Sequences: 2352
Number of extensions: 12764
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)