Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1932
(787 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 25 0.69
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 25 0.69
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 25 0.69
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 25 0.69
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 23 2.8
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 23 2.8
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 23 2.8
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 23 3.7
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 4.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 4.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 4.8
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 8.4
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 165 NEPYAGESKVVRFYLQQQMVHRHQHHLVPEKK 260
NEPY + + +++ HQHH + E K
Sbjct: 104 NEPYQRTHENMLLRHHEEVADGHQHHFLHENK 135
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 25.0 bits (52), Expect = 0.69
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 116 SVLPCLNMIRCCTRMKQRTVCR--RV*SCSILSATTNGS 226
S+ C N C K RT C+ R+ C ++ + +GS
Sbjct: 38 SISECKNNGECVINKKNRTACKACRLRKCLLVGMSKSGS 76
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 165 NEPYAGESKVVRFYLQQQMVHRHQHHLVPEKK 260
NEPY + + +++ HQHH + E K
Sbjct: 104 NEPYQRTHENMLLRHHEEVADGHQHHFLHENK 135
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 165 NEPYAGESKVVRFYLQQQMVHRHQHHLVPEKK 260
NEPY + + +++ HQHH + E K
Sbjct: 104 NEPYQRTHENMLLRHHEEVADGHQHHFLHENK 135
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 609 TLLTIKIIRKTNIEKSNPRPETIVSNL 689
T L I + + KS P P TI+SN+
Sbjct: 210 TSLQIMVYLQHIFVKSRPSPATIISNV 236
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 609 TLLTIKIIRKTNIEKSNPRPETIVSNL 689
T L I + + KS P P TI+SN+
Sbjct: 210 TSLQIMVYLQHIFVKSRPSPATIISNV 236
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 609 TLLTIKIIRKTNIEKSNPRPETIVSNL 689
T L I + + KS P P TI+SN+
Sbjct: 530 TSLQIMVYLQHIFVKSRPSPATIISNV 556
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +3
Query: 633 RKT-NIEKSNPRPETIVSNLLQDSSK 707
RKT +E+ +P P + VS ++DSS+
Sbjct: 106 RKTWKVEEDSPSPTSSVSPEVKDSSR 131
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 414 TCATDTNNIQFVF--DAVTDVIIANNLRGCGLYYR 512
+C ++ F F + V+++ + CG+YYR
Sbjct: 152 SCKVMIQSVSFAFPINLSVPVLLSGLIAMCGMYYR 186
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 414 TCATDTNNIQFVF--DAVTDVIIANNLRGCGLYYR 512
+C ++ F F + V+++ + CG+YYR
Sbjct: 385 SCKVMIQSVSFAFPINLSVPVLLSGLIAMCGMYYR 419
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 414 TCATDTNNIQFVF--DAVTDVIIANNLRGCGLYYR 512
+C ++ F F + V+++ + CG+YYR
Sbjct: 385 SCKVMIQSVSFAFPINLSVPVLLSGLIAMCGMYYR 419
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 83 IHFFLSDRCPPTSNN 39
IH LSD+ PP + N
Sbjct: 217 IHNLLSDKNPPNTEN 231
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,578
Number of Sequences: 336
Number of extensions: 3376
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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