Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1932
(787 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0561 - 15476484-15476649,15476814-15476893,15476971-154770... 104 9e-23
12_02_0966 - 24906361-24906958,24907084-24907250,24907403-249076... 52 4e-07
11_01_0656 - 5301048-5301441,5301779-5301976,5302056-5302228,530... 49 5e-06
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 48 8e-06
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 48 8e-06
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 48 8e-06
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 48 8e-06
10_01_0089 + 1103841-1104152,1104809-1104946,1105527-1105631,110... 48 1e-05
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 46 3e-05
06_01_0079 - 633595-633985,634346-634543,634864-635036,635355-63... 45 6e-05
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 45 6e-05
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 38 0.007
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 37 0.016
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 36 0.037
02_05_0639 - 30552148-30552265,30552362-30552523,30553177-305532... 35 0.084
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 34 0.15
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 31 1.0
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 31 1.0
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 31 1.4
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 30 2.4
02_04_0496 + 23446039-23446964,23452755-23452845,23452946-234529... 30 2.4
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 29 3.2
11_01_0225 + 1761282-1762232,1762601-1762726,1762818-1763135 28 7.3
01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 28 7.3
07_03_0684 + 20675947-20676157,20676236-20676336,20676428-206766... 28 9.7
>05_03_0561 -
15476484-15476649,15476814-15476893,15476971-15477030,
15477117-15477210,15477287-15477421,15477601-15477656,
15478359-15478460,15478544-15478651,15479206-15479283,
15479432-15479521,15480061-15480123
Length = 343
Score = 104 bits (249), Expect = 9e-23
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = +1
Query: 34 FKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFDSICN 213
++L+DVGGQR+ER+KWIH FE V A+IFC A+SEYDQ+L EDET NRM E+ +LFD +
Sbjct: 178 YRLYDVGGQRNERRKWIHLFEGVNAVIFCAAISEYDQMLFEDETKNRMMETKELFDWVLK 237
Query: 214 NKWFTDTSIILFLKR 258
+ F TS ILFL +
Sbjct: 238 QRCFEKTSFILFLNK 252
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Frame = +3
Query: 207 LQQQMVHRHQHHLVPEKKDLFEEKIRRSPLTIC--FPEY----TGAQEYGEAAAYIQAQF 368
L+Q+ + L K D+FE+KI++ PL++C F +Y G QE A +++ +F
Sbjct: 236 LKQRCFEKTSFILFLNKFDIFEKKIQKVPLSVCEWFKDYQPIAPGKQEVEHAYEFVKKKF 295
Query: 369 E 371
E
Sbjct: 296 E 296
>12_02_0966 -
24906361-24906958,24907084-24907250,24907403-24907650,
24907824-24908001,24908196-24908372,24908459-24908563,
24908633-24908770,24909757-24910836
Length = 896
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 67 ERKKWIHCFEDVTAIIFCVAMSEYDQVLHE--DETTNRMQESLKLFDSICNNKWFTDTSI 240
E KW+ F+DV +IFCVA+S+YD+ + N+M E+ +LF+SI + F
Sbjct: 711 ENCKWLQMFDDVRLVIFCVAVSDYDEYYEDANGNVVNKMMETRQLFESIALHPIFEQMDF 770
Query: 241 ILFLKR 258
+L L +
Sbjct: 771 LLLLTK 776
>11_01_0656 -
5301048-5301441,5301779-5301976,5302056-5302228,
5302691-5302935,5303014-5303191,5303578-5303760,
5303858-5303962,5304621-5304758,5304846-5305802
Length = 856
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Frame = +1
Query: 76 KWIHCFEDVTAIIFCVAMSEYDQV-----LHEDETTNRMQESLKLFDSICNNKWFTDTSI 240
KW+ FEDV +IF VA+S+YDQV N+M +S +LF++ F DT
Sbjct: 676 KWVEMFEDVRMVIFSVALSDYDQVGPPVYGSSRPLLNKMMQSKELFEATIRQPCFCDTPF 735
Query: 241 ILFLKR 258
+L L +
Sbjct: 736 VLVLNK 741
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Frame = +3
Query: 243 LVPEKKDLFEEKIRRSPLTIC--FPEYTGAQEY-------GEAAAYIQAQF-EAKNKSTT 392
LV K DLFEEKI R+PLT C F +++ + + +A Y+ +F + + T
Sbjct: 737 LVLNKYDLFEEKINRAPLTTCEWFNDFSPVRTHHNNQSLAQQAYYYVAVKFKDLYYEHTG 796
Query: 393 KEIYCHMTCATDTNNIQFVFDAVTDVI 473
++++ A D + F V +++
Sbjct: 797 RKLFVWQARARDRQTVDEAFKYVREIL 823
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 48.0 bits (109), Expect = 8e-06
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLF 198
+KN++F ++DVGGQ R W H F++ +IF V ++ D+V+ + +RM +L
Sbjct: 75 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 134
Query: 199 DSI 207
D++
Sbjct: 135 DAV 137
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 48.0 bits (109), Expect = 8e-06
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLF 198
+KN++F ++DVGGQ R W H F++ +IF V ++ D+V+ + +RM +L
Sbjct: 181 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 240
Query: 199 DSI 207
D++
Sbjct: 241 DAV 243
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 48.0 bits (109), Expect = 8e-06
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLF 198
+KN++F ++DVGGQ R W H F++ +IF V ++ D+V+ + +RM +L
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 117
Query: 199 DSI 207
D++
Sbjct: 118 DAV 120
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 48.0 bits (109), Expect = 8e-06
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLF 198
+KN++F ++DVGGQ R W H F++ +IF V ++ D+V+ + +RM +L
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 117
Query: 199 DSI 207
D++
Sbjct: 118 DAV 120
>10_01_0089 +
1103841-1104152,1104809-1104946,1105527-1105631,
1106403-1106577,1107124-1107398,1108222-1108391,
1108508-1109084
Length = 583
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 76 KWIHCFEDVTAIIFCVAMSEYDQ--VLHEDETTNRMQESLKLFDSICNNKWFTDTSIILF 249
K + ED+ AIIFC+++++YDQ V E N+M S LF+ + + F DT +L
Sbjct: 408 KCLGMLEDIRAIIFCISLADYDQTWVQSSGEPCNKMIASRDLFEDVIRHPSFEDTPCVLL 467
Query: 250 LKRRISSRKKFA 285
L + + +K +
Sbjct: 468 LNKYDAFEEKIS 479
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 243 LVPEKKDLFEEKIRRSPLTIC 305
L+ K D FEEKI R PLT+C
Sbjct: 466 LLLNKYDAFEEKISRVPLTVC 486
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/63 (31%), Positives = 38/63 (60%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLF 198
+KN++F ++DVGGQ R W H F++ +IF V ++ ++V+ + +RM +L
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELR 117
Query: 199 DSI 207
D++
Sbjct: 118 DAV 120
>06_01_0079 -
633595-633985,634346-634543,634864-635036,635355-635599,
635683-635860,636291-636473,636769-636873,637709-637846,
637933-638925
Length = 867
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = +1
Query: 64 SERKKWIHCFEDVTAIIFCVAMSEYDQV-----LHEDETTNRMQESLKLFDSICNNKWFT 228
+E KW+ FEDV+ +IF VA+S+YDQ+ N+M +S LF++ F
Sbjct: 684 NEGCKWVEMFEDVSMVIFSVALSDYDQLGAPSSGGNSPLVNKMIQSRDLFEATIRQPCFR 743
Query: 229 DTSIILFLKR 258
D +L L +
Sbjct: 744 DMPFVLVLNK 753
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Frame = +3
Query: 243 LVPEKKDLFEEKIRRSPLTIC--FPEYTGAQEY-------GEAAAYIQAQF-EAKNKSTT 392
LV K DLFEEKI R PL+ C F ++ + + +A Y+ +F E T
Sbjct: 749 LVLNKFDLFEEKIGRVPLSTCEWFSDFCPLRTHHNNQSLAHQAFYYVAMKFKELYAACTD 808
Query: 393 KEIYCHMTCATDTNNIQFVFDAVTDVIIANNLRGCGLYY 509
++++ A D + F + +V+ + + G YY
Sbjct: 809 RKLFVWQARARDRLTVDEAFKFIREVLKWEDEKDGGGYY 847
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLK 192
+KN++F ++DVGGQ R W H F++ +IF V ++ ++V+ + +RM L+
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNELQ 115
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKL 195
+ N+ F+++D+GGQ S R W F + AII+ V S+ D+++ E + + E +L
Sbjct: 73 YNNIKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVTAKEEFHAILEEDEL 131
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQV 147
+KN+ F ++DVGGQ R W H F + A+I+ V + +++
Sbjct: 58 YKNVVFTVWDVGGQEKLRPLWRHYFNNTDALIYVVDSLDRERI 100
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 35.9 bits (79), Expect = 0.037
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQV 147
+KN+ F ++DVGGQ R W H F + +I+ V + +++
Sbjct: 58 YKNVMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERI 100
>02_05_0639 -
30552148-30552265,30552362-30552523,30553177-30553298,
30553515-30553596,30554407-30554699
Length = 258
Score = 34.7 bits (76), Expect = 0.084
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 25 NLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQV 147
N+ KL+D+GGQR R W V+AI++ V ++ D +
Sbjct: 137 NVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSI 177
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQV 147
+KN+ F ++DVGGQ R W F + A+I+ V + +++
Sbjct: 57 YKNVAFTVWDVGGQDKLRPLWRQYFRNADALIYVVDSMDRERI 99
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 16 SFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 123
S + FK FD+GG + R+ W + V A+++ V
Sbjct: 60 SIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLV 95
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 16 SFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 123
S + FK FD+GG + R+ W + V A+++ V
Sbjct: 60 SIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLV 95
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVL 150
+KN+ F ++DVGGQ R W + A+I+ V + ++++
Sbjct: 58 YKNVVFTVWDVGGQEKLRPLWKMYLSNSDALIYVVDSLDRERII 101
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 29.9 bits (64), Expect = 2.4
Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Frame = -2
Query: 324 RLYILESIW*AAICEFFPRRDPSFQEQDDAGVG---EPFVVADRIEQL*TLLHTVRCFIL 154
RL I + A I F ++ QD G G PF V I L TLL V C L
Sbjct: 182 RLAIEFGVGIAVIVLCFVDKNALSNIQDKLGNGMTRAPFAV---IVGLFTLLSLVACIPL 238
Query: 153 VQ----HLIIFRHGNTEYDRGHVLEAMNPFLPLRSLPAHV 46
+ H+I+ R G T YD + AM+ P AH+
Sbjct: 239 GELFFFHMILIRKGITTYDYVVAMRAMSEAAPEDDEEAHI 278
>02_04_0496 +
23446039-23446964,23452755-23452845,23452946-23452996,
23453080-23453206,23453390-23453425,23453443-23453473,
23453488-23453576,23454341-23454462,23455601-23455778,
23458343-23458470,23458592-23458658,23459167-23459272,
23459365-23459473,23459965-23460084,23460187-23460220,
23460471-23460547,23460640-23460692,23460847-23460898,
23461270-23461767
Length = 964
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +1
Query: 106 AIIFCVAMSEYDQVLHEDETTNRMQESLKLFDSICNNKWFTDTSIILFLKRRISSRKKFA 285
A +F V M EYD+ H + NR +LFD+I K ++ S IL S R+K
Sbjct: 372 AFMFLV-MQEYDKRSHGIDFLNRDFVVRELFDNIL--KHMSEASCILIALHLFSYRRKSG 428
Query: 286 DRRSPYAFQNIQ 321
Y F +Q
Sbjct: 429 HSTYTYGFFMLQ 440
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 19 FKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSE 135
+ + ++D+GGQ++ R W + FE +++ V S+
Sbjct: 57 YHKYSLNIWDIGGQKTIRSYWRNYFEQTDGLVWVVDSSD 95
>11_01_0225 + 1761282-1762232,1762601-1762726,1762818-1763135
Length = 464
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 186 TLLHTVRCFILVQHLIIFRHGNTEYDRGHVLEAMNPFLPLRS---LPAHVEQFEIEVFEG 16
+L + + CF + L+I+R YD+G + + F+ L S + ++ FE+E F G
Sbjct: 342 SLRNILECFPELSMLVIWRMDGIVYDKGSDVLFDSSFVGLGSVSCVKTRIQYFELEGFRG 401
>01_05_0279 +
20318440-20318688,20318785-20318931,20319449-20319611,
20319770-20319887,20320607-20320676,20320774-20320854,
20320924-20320959,20321129-20321149,20321586-20321642,
20321716-20321827,20321905-20322178,20322454-20322556,
20323244-20323459,20324615-20324665,20325339-20327963
Length = 1440
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 15/87 (17%)
Frame = +1
Query: 10 HFSF-KNLNFKLFDVGGQRSERK-------KWIHCFEDVTAIIFCVAMSEYDQV------ 147
HF F +NL ++++ SE++ KW+ C ++ IIF V Y QV
Sbjct: 221 HFVFDRNLRSSVYNINDDVSEKQFPEFNNTKWLECTQEQNEIIF-VPSGWYHQVHNLIWA 279
Query: 148 LHEDETTNR-MQESLKLFDSICNNKWF 225
++ NR + E+LK N+ WF
Sbjct: 280 ANDSRPKNRILTENLKEDTISINHNWF 306
>07_03_0684 +
20675947-20676157,20676236-20676336,20676428-20676630,
20677024-20677438
Length = 309
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 379 FFASNCAWMYAAASPYSCA 323
F A C+W AAASP SCA
Sbjct: 234 FTADACSWGTAAASPPSCA 252
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,909,633
Number of Sequences: 37544
Number of extensions: 368595
Number of successful extensions: 1148
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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