Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1932
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   9.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.8  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 156 LVQHLIIFRHGNTEYDRGHVLEAMNPFL 73
           L Q  +IFRHG+   D  + +   +P+L
Sbjct: 2   LKQINVIFRHGDRIPDEKNEMYPKDPYL 29


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 156 LVQHLIIFRHGNTEYDRGHVLEAMNPFL 73
           L Q  +IFRHG+   D  + +   +P+L
Sbjct: 17  LKQINVIFRHGDRIPDEKNEMYPKDPYL 44


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 223 FTDTSIILFLKRRISSRKKFADRRSPYAF 309
           +T TSI+L ++RR    +    RRS   F
Sbjct: 222 YTYTSILLEIRRRSKKSEDDKIRRSSIGF 250


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 657 NPRPETIVSNLLQDSSK 707
           NP+P T    LLQD SK
Sbjct: 224 NPQPLTGQQELLQDFSK 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,583
Number of Sequences: 438
Number of extensions: 4257
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)