Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1929
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   8.1  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    23   8.1  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    23   8.1  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    23   8.1  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    23   8.1  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   8.1  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   8.1  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 17/59 (28%), Positives = 23/59 (38%)
 Frame = +1

Query: 334 GDPARAHPGVPGLLRRLGSLDLQSGAGPAALFARPDIALEGAL*GAVQSAERGVRCSAG 510
           GD     PG PGL  R G  +      P    A+ +  L+G L G       G++   G
Sbjct: 536 GDAKEGRPGAPGLPGRDG--EKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKGDKG 592


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 86  TTGCRPDAMDRCLG 127
           +T C+PD  +RC+G
Sbjct: 69  STRCKPDEGERCIG 82


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 86  TTGCRPDAMDRCLG 127
           +T C+PD  +RC+G
Sbjct: 67  STRCKPDEGERCIG 80


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 86  TTGCRPDAMDRCLG 127
           +T C+PD  +RC+G
Sbjct: 69  STRCKPDEGERCIG 82


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 86  TTGCRPDAMDRCLG 127
           +T C+PD  +RC+G
Sbjct: 67  STRCKPDEGERCIG 80


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 106 RNGSMSRAVEAASKNRLHMDRNPQHSR 186
           RNGS   A    SKNR+     P+HS+
Sbjct: 48  RNGSPKFAPAVQSKNRMPPVPPPKHSQ 74


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 458 APSRAMSGRANRAAGPAP 405
           APSRA S +  R  GP P
Sbjct: 158 APSRAASKQGRRLFGPTP 175


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,283
Number of Sequences: 2352
Number of extensions: 15586
Number of successful extensions: 46
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)