Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1926
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AF016433-6|AAB65391.1| 335|Caenorhabditis elegans Seven tm rece... 30 1.6
Z81537-11|CAB04377.2| 329|Caenorhabditis elegans Hypothetical p... 29 4.8
U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm recept... 28 6.4
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 28 8.5
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 28 8.5
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 28 8.5
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 28 8.5
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 8.5
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 8.5
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 28 8.5
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 8.5
>Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical
protein R53.2 protein.
Length = 218
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +2
Query: 278 FPARETEIGKVINNYLSSKNELSDEAIHLLFSANRWERAQNIIKTLEGGTTIVLDRYCYS 457
FP R + IGK+I+ YL + ++ + A+HLLFSA+R+ + Q I + G ++ DRYCYS
Sbjct: 53 FPDRSSSIGKLIDQYLRKEIDMDEHALHLLFSADRFSKNQMIRDNIAKGIDVICDRYCYS 112
Query: 458 GVAFSAAKGLDLNWCKS 508
GVA+S AKGL W +S
Sbjct: 113 GVAYSLAKGLPEQWVRS 129
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 475 SKRFRSELVQVSDAGLPQPDKVFFLTMPLEAVLKRNGFGNERYEVVDFQKKVWNIYSKL- 651
+K + V+ SD GLP+PD V F + E +R GFG ER E Q+KV + L
Sbjct: 119 AKGLPEQWVRSSDVGLPKPDAVLFFDVSPEVAAQRGGFGEERLETATIQQKVAAVMPTLR 178
Query: 652 IEPNWDVLDANRTMDAIQTDI 714
+ W ++A+ +D+++ ++
Sbjct: 179 DDAYWKTVNADGDLDSVEKNV 199
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +3
Query: 159 NMKRGALIVIEGIDRTGKSTQGKILVESLKK 251
+ KRG LIV EG+DR+GKSTQ K LVES+ K
Sbjct: 4 DQKRGLLIVFEGLDRSGKSTQAKRLVESINK 34
>AF016433-6|AAB65391.1| 335|Caenorhabditis elegans Seven tm
receptor protein 131 protein.
Length = 335
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -2
Query: 255 CAF-SSFQLIFSLVSTSLFYRYL 190
C F SSF L SL+ST FYRYL
Sbjct: 92 CLFGSSFGLCISLLSTQFFYRYL 114
>Z81537-11|CAB04377.2| 329|Caenorhabditis elegans Hypothetical
protein F41D3.6 protein.
Length = 329
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 532 DKVFFLTMPLEAVLKRNGFGNERYEVV 612
DK +LT P+ ++ + G GN+ +EV+
Sbjct: 40 DKQKYLTFPMTTIVYKGGLGNQLFEVL 66
>U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm receptor
protein 138 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = -2
Query: 258 MCAF-SSFQLIFSLVSTSLFYRYL 190
MC + +S+ ++ SL++T FYRYL
Sbjct: 88 MCLYGASYSVLISLLATQFFYRYL 111
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 509 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 548
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 351 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 390
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 509 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 548
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 351 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 390
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 622 KKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSNHWRS*G 741
++VWN I+ +DVL+ +R + D+LS R G
Sbjct: 382 QRVWNELQNSIDRRFDVLERHRIQEGNSNDLLSRLARGIG 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,346,026
Number of Sequences: 27780
Number of extensions: 367518
Number of successful extensions: 901
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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