Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1925
(791 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1252 - 35748000-35748173,35748243-35748375,35749771-357498... 90 2e-18
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538... 89 3e-18
05_05_0135 - 22626163-22626198,22626391-22626441,22626516-226266... 89 5e-18
07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343 87 2e-17
03_04_0055 + 16891212-16891848,16893166-16893206 83 2e-16
08_01_0498 - 4327502-4328395 82 4e-16
01_07_0092 - 41021743-41022276 74 2e-13
06_01_1181 + 10148653-10149405 72 5e-13
02_05_0591 - 30183105-30183869 72 6e-13
01_07_0091 - 41013837-41014271 63 3e-10
02_05_0592 - 30210219-30210757,30210898-30210919 48 1e-05
09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439 46 5e-05
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 39 0.004
02_05_1152 + 34494423-34494586,34494725-34494781,34494851-344949... 30 1.8
11_01_0776 + 6476743-6477539,6478658-6479481,6479803-6480790,648... 30 2.4
03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561 29 3.2
12_02_0925 - 24398851-24398998,24399478-24399718,24399886-244005... 29 5.6
04_03_0923 + 20843477-20845044,20846081-20846996 28 9.8
>01_06_1252 -
35748000-35748173,35748243-35748375,35749771-35749847,
35750465-35750509,35750584-35750679,35751125-35751130,
35751259-35751388,35751510-35751706
Length = 285
Score = 90.2 bits (214), Expect = 2e-18
Identities = 42/65 (64%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Frame = +2
Query: 317 LEDENNSDSGSKSNAP-LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFI 493
+ D + +SGS + +REQDRFLPIANI++IMK+A+P NGKIAKDA+E +QEC+SEFI
Sbjct: 1 MADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFI 60
Query: 494 SFVTS 508
SFVTS
Sbjct: 61 SFVTS 65
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +1
Query: 439 KDSKRCKGMCSGMYIRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRL 618
KD+K C +I +ASD+C+ EKRKTINGED+LFA+ TLGF+ YV PL++
Sbjct: 46 KDAKETLQECVSEFISF---VTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKI 102
Query: 619 YLTKYREI 642
YL KYRE+
Sbjct: 103 YLHKYREM 110
>05_07_0196 +
28352320-28352522,28352679-28352808,28353774-28353851,
28355562-28355664,28356109-28356302,28356501-28356518
Length = 241
Score = 89.4 bits (212), Expect = 3e-18
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = +2
Query: 323 DENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFV 502
D + G +EQDRFLPIANI +IM+RA+PENGKIAKD++E VQEC+SEFISF+
Sbjct: 6 DGTENGGGGGGGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFI 65
Query: 503 TSRLVTDARLKNAR 544
TS +D LK R
Sbjct: 66 TSE-ASDKCLKEKR 78
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +1
Query: 439 KDSKRCKGMCSGMYIRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRL 618
KDSK C +I +ASD+C EKRKTING+D+++++ TLGF++YV+PL+L
Sbjct: 48 KDSKESVQECVSEFISF---ITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKL 104
Query: 619 YLTKYRE 639
YL YRE
Sbjct: 105 YLRLYRE 111
>05_05_0135 -
22626163-22626198,22626391-22626441,22626516-22626608,
22627249-22627254,22628051-22628180,22628333-22628583
Length = 188
Score = 88.6 bits (210), Expect = 5e-18
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = +2
Query: 344 GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTS 508
G +REQDRFLPIANI++IMK+AIP NGKIAKDA+E VQEC+SEFISF+TS
Sbjct: 29 GGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITS 83
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/68 (48%), Positives = 49/68 (72%)
Frame = +1
Query: 439 KDSKRCKGMCSGMYIRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRL 618
KD+K C +I +ASD+C+ EKRKTING+D+L+A+ TLGF++Y++PL++
Sbjct: 64 KDAKETVQECVSEFISF---ITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKV 120
Query: 619 YLTKYREI 642
YL KYRE+
Sbjct: 121 YLQKYREM 128
>07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343
Length = 229
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/64 (62%), Positives = 53/64 (82%), Gaps = 4/64 (6%)
Frame = +2
Query: 326 ENNSDSGSKSNA----PLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFI 493
+++++SG SNA REQDRFLPIAN+++IMKRA+P N KI+KDA+E VQEC+SEFI
Sbjct: 3 DSDNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFI 62
Query: 494 SFVT 505
SF+T
Sbjct: 63 SFIT 66
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +1
Query: 424 NTREWKDSKRCKGMCSGMYIRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYV 603
N + KD+K C +I +ASD+C+ EKRKTING+D+L+A+ TLGF++Y+
Sbjct: 43 NAKISKDAKETVQECVSEFISF---ITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYI 99
Query: 604 KPLRLYLTKYREI 642
PL+LYL K+RE+
Sbjct: 100 DPLKLYLHKFREL 112
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/66 (59%), Positives = 53/66 (80%), Gaps = 6/66 (9%)
Frame = +2
Query: 326 ENNSDSGSKSN------APLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISE 487
++++DSG SN + REQDRFLPIAN+++IMK+A+P N KI+KDA+E VQEC+SE
Sbjct: 3 DSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSE 62
Query: 488 FISFVT 505
FISF+T
Sbjct: 63 FISFIT 68
Score = 70.9 bits (166), Expect = 1e-12
Identities = 35/73 (47%), Positives = 49/73 (67%)
Frame = +1
Query: 424 NTREWKDSKRCKGMCSGMYIRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYV 603
N + KD+K C +I +ASD+C+ EKRKTING+D+L+A+ TLGF++YV
Sbjct: 45 NAKISKDAKETVQECVSEFISF---ITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYV 101
Query: 604 KPLRLYLTKYREI 642
PL+ YL K+REI
Sbjct: 102 DPLKHYLHKFREI 114
>08_01_0498 - 4327502-4328395
Length = 297
Score = 82.2 bits (194), Expect = 4e-16
Identities = 34/54 (62%), Positives = 47/54 (87%)
Frame = +2
Query: 344 GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVT 505
G ++P +EQDRFLPIAN+++IMKR++P N KI+K+++E VQEC+SEFISFVT
Sbjct: 49 GGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVT 102
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +1
Query: 424 NTREWKDSKRCKGMCSGMYIRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYV 603
N + K+SK C +I +ASD+C+ EKRKTING+D+L+A+ TLGF+ YV
Sbjct: 79 NAKISKESKETVQECVSEFISF---VTGEASDKCQREKRKTINGDDLLWAMTTLGFEAYV 135
Query: 604 KPLRLYLTKYRE 639
PL+ YL +YRE
Sbjct: 136 GPLKSYLNRYRE 147
>01_07_0092 - 41021743-41022276
Length = 177
Score = 73.7 bits (173), Expect = 2e-13
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = +2
Query: 365 LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSRLVTDARLKNAR 544
++EQDR LPIAN+ +IMK+ +P N KI+K+A+E +QEC+SEFISFVT + +
Sbjct: 32 IKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRK 91
Query: 545 PSTGKMYC 568
G C
Sbjct: 92 TVNGDDVC 99
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +1
Query: 424 NTREWKDSKRCKGMCSGMYIRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYV 603
N + K++K C +I +ASD+C EKRKT+NG+DV +A LGFD+YV
Sbjct: 55 NAKISKEAKETMQECVSEFISF---VTGEASDKCHKEKRKTVNGDDVCWAFGALGFDDYV 111
Query: 604 KPLRLYLTKYREI 642
P+R YL KYRE+
Sbjct: 112 DPMRRYLNKYREL 124
>06_01_1181 + 10148653-10149405
Length = 250
Score = 72.1 bits (169), Expect = 5e-13
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = +2
Query: 359 APLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVT 505
A +REQDR +PIAN+ +IM+R +P + KI+ DA+E +QEC+SEFISFVT
Sbjct: 27 AVVREQDRLMPIANVIRIMRRVLPPHAKISDDAKEVIQECVSEFISFVT 75
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = +1
Query: 508 QASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYRE 639
+A+DRC E RKT+ ED+++A++ LGFD+YV PL YL + RE
Sbjct: 77 EANDRCHREHRKTVTAEDLVWAMDRLGFDDYVPPLTAYLRRMRE 120
>02_05_0591 - 30183105-30183869
Length = 254
Score = 71.7 bits (168), Expect = 6e-13
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +2
Query: 326 ENNSDSGSKSNAP-LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFV 502
+ N + + AP +REQDR +PIAN+ +IM+R +P + KI+ DA+E +QEC+SE+ISF+
Sbjct: 16 DGNGGAQQAAAAPAIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFI 75
Query: 503 T 505
T
Sbjct: 76 T 76
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +1
Query: 442 DSKRCKGMCSGMYIRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLY 621
D+K C YI +A++RC+ E+RKTI EDVL+A++ LGFD+YV+PL +Y
Sbjct: 59 DAKETIQECVSEYISF---ITGEANERCQREQRKTITAEDVLWAMSRLGFDDYVEPLGVY 115
Query: 622 LTKYRE 639
L +YRE
Sbjct: 116 LHRYRE 121
>01_07_0091 - 41013837-41014271
Length = 144
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +2
Query: 374 QDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSRLVTDARLKNARPST 553
QD LPIAN+ +IMK +P KI+K A+E +QEC +EFISFVT R + +
Sbjct: 5 QDNLLPIANVGRIMKDGLPPQAKISKRAKETIQECATEFISFVTGEASERCRRERRKTVN 64
Query: 554 GKMYC 568
G C
Sbjct: 65 GDDVC 69
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +1
Query: 439 KDSKRCKGMCSGMYIRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRL 618
K SKR K +AS+RC+ E+RKT+NG+DV A+ +LG D+Y +
Sbjct: 27 KISKRAKETIQECATEFISFVTGEASERCRRERRKTVNGDDVCHAMRSLGLDHYADAMHR 86
Query: 619 YLTKYRE 639
YL +YRE
Sbjct: 87 YLQRYRE 93
>02_05_0592 - 30210219-30210757,30210898-30210919
Length = 186
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 457 KGMCSGMYIRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYR 636
KG+ + ++AS++ K E R+T+ ED L + LGFD YV P+ Y+ YR
Sbjct: 58 KGLTHDCAVEFVGFVGDEASEKAKAEHRRTVAPEDYLGSFGDLGFDRYVDPMDAYIHGYR 117
Query: 637 E 639
E
Sbjct: 118 E 118
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +2
Query: 302 NSDDVLEDENNSDS--GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQE 475
N D V + SD GS +NA L P+AN+ +++K+ +P KI A+ +
Sbjct: 11 NMDQVKKAAVRSDGVGGSATNAEL-------PMANLVRLIKKVLPGKAKIGGAAKGLTHD 63
Query: 476 CISEFISFVTSRLVTDARLKNAR 544
C EF+ FV A+ ++ R
Sbjct: 64 CAVEFVGFVGDEASEKAKAEHRR 86
>09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439
Length = 167
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +1
Query: 481 IRIHIVCNEQASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKYR 636
I IH + + A+D CK KR+TIN +DVL AL+ + F +V+PL L ++R
Sbjct: 75 IFIHYL-SATANDMCKESKRQTINADDVLKALDEMEFPEFVEPLNTSLQEFR 125
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/46 (34%), Positives = 32/46 (69%)
Frame = +2
Query: 371 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTS 508
++D LP + + KI+K +P + ++A+DA++ + EC EFI+ ++S
Sbjct: 11 KEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSS 56
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 502 NEQASDRCKVEKRKTINGEDVLFALNTLGFDNYVKPLR 615
+ ++++ C E +KTI E VL AL LGF Y++ ++
Sbjct: 55 SSESNEVCSREDKKTIAPEHVLRALQDLGFREYIEEVQ 92
>02_05_1152 +
34494423-34494586,34494725-34494781,34494851-34494908,
34494989-34495088,34495270-34495383,34495588-34495810,
34496112-34496246,34496575-34496679,34496906-34497001,
34497387-34497516,34497933-34497983,34498538-34498648,
34499267-34499376,34499490-34499655,34499740-34499820,
34499907-34499975,34500099-34500212,34500699-34500760,
34500894-34500990,34501152-34501271
Length = 720
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 382 IFTNREYS*NNETGNTREWKDSKRCKGMCSGMYIRIHIVCN-EQASDRCKVEKRKTIN-G 555
I+ + YS N+ G + K KRC G+ SG + + +CN + +D + R ++ G
Sbjct: 506 IYLPQRYSPNDIEGKSFCRKTLKRCVGLHSGSSVVVGCICNGDSNTDGLREAVRVALHGG 565
Query: 556 EDVLFALN 579
V+F N
Sbjct: 566 AQVIFMEN 573
>11_01_0776 +
6476743-6477539,6478658-6479481,6479803-6480790,
6482633-6483545
Length = 1173
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Frame = +1
Query: 445 SKRCKGMCSGMYIRIHIVCNEQASDRCKVEKRKTING------------EDVLFALNTLG 588
S R C G+ + + I+ AS CK E I+G +++L + +LG
Sbjct: 351 SYRITAKCGGLPLAVIIIAGLLASLPCKTELWYNIDGCLCSSVTTDIDLDEILKEIISLG 410
Query: 589 FDN---YVKPLRLYLTKYRE 639
+DN Y+K LYL+ Y E
Sbjct: 411 YDNLPHYLKTCLLYLSLYSE 430
>03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561
Length = 827
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -1
Query: 356 CSYSQSPSCF----HLLTHHQN*QQMCHPLPKIHCPIS*VISKFVAIHD*KF 213
C YS +P+C + + H N Q C + I C ++ V KFV + D F
Sbjct: 294 CHYSPTPTCSCPPGYEMNSHGNWSQGCKAIVDISCSVAKVQFKFVHLPDTDF 345
>12_02_0925 -
24398851-24398998,24399478-24399718,24399886-24400536,
24400625-24400828,24400902-24401583,24401678-24401934,
24402010-24402704,24403150-24403397
Length = 1041
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +1
Query: 466 CSG-MYIRIHIVCNEQASDRCKVEK--RKTIN--GEDVLFALNTLGFDNYVKPLRLYLTK 630
C+G M+ I Q+ D V K RK + G + + + T NY K RL +
Sbjct: 376 CNGIMFFHKSIDATGQSQDANFVLKEIRKVVREIGSEHVVQIITYNGSNYKKACRLLRQE 435
Query: 631 YREIVMSPC 657
Y+ IV PC
Sbjct: 436 YKTIVWQPC 444
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 377 DRFLPIANIAKIMKRAIPENGKIAKDARECVQECIS 484
D+F P+ +I ++ A EN K+A A EC Q C+S
Sbjct: 356 DKFYPVQSI-RLPHSA--ENVKVATSADECSQACLS 388
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,883,632
Number of Sequences: 37544
Number of extensions: 374123
Number of successful extensions: 778
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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