Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1925
         (791 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    26   1.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.2  

>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 380 RFLPIANIAKIMKRAIPENGKIAKDARE 463
           +F PI     IMKR +   GK+ KD  +
Sbjct: 272 QFRPIEKYWAIMKRRLKAKGKVVKDINQ 299


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 491 ISFVTSRLVTDARLKNARPS 550
           ++F+T R+  + RLK AR S
Sbjct: 467 LNFITERVAQELRLKRARVS 486


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 287 DTFVVNSDDVLEDENNSDSGSKSNAPLRE 373
           D  V N DDV + E + +    SN P+ +
Sbjct: 90  DLQVANVDDVEDSEGSHEPDGASNTPVTD 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,519
Number of Sequences: 2352
Number of extensions: 15736
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)