Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1924
         (784 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   6.1  
DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.       24   6.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   6.1  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 672 ARVMLLAGPFRPMFSTRSRMFFCITRI 752
           ARV L A   + +  T+ R+ FCI+R+
Sbjct: 512 ARVRLPAKAAKALDGTKLRLGFCISRV 538


>DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.
          Length = 403

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 669 LARVMLLAGPFRPMFSTRSRMFFCITRILSSGW 767
           L  + L AG FRP F++       I R   +GW
Sbjct: 180 LQMIQLSAGSFRPPFASGFDARDTIARDFRTGW 212


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
          transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 96 GGAPSGQRNHVSRNALPASA 37
          GG PSG  +++S + +P  A
Sbjct: 23 GGGPSGMYDNISNDGIPMDA 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,277
Number of Sequences: 2352
Number of extensions: 18112
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)