Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1924
         (784 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457271-1|CAG33552.1|  344|Homo sapiens NAGK protein.                 42   0.002
BC005371-1|AAH05371.1|  344|Homo sapiens N-acetylglucosamine kin...    42   0.002
BC001029-1|AAH01029.1|  344|Homo sapiens N-acetylglucosamine kin...    42   0.002
AK222645-1|BAD96365.1|  344|Homo sapiens N-Acetylglucosamine kin...    42   0.002
AK001812-1|BAA91923.1|  344|Homo sapiens protein ( Homo sapiens ...    42   0.002
AJ242910-1|CAB61848.1|  344|Homo sapiens N-Acetylglucosamine kin...    42   0.002
AC007881-1|AAY14748.1|  344|Homo sapiens unknown protein.              42   0.002
BC037988-1|AAH37988.1|  904|Homo sapiens MICAL-like 2 protein.         35   0.29 
AK074068-1|BAB84894.1|  585|Homo sapiens FLJ00139 protein protein.     35   0.29 
BC104036-1|AAI04037.1|  428|Homo sapiens ARL13B protein protein.       33   0.88 
BC104035-1|AAI04036.1|  428|Homo sapiens ARL13B protein protein.       33   0.88 
BC094725-1|AAH94725.1|  321|Homo sapiens ADP-ribosylation factor...    33   0.88 
CR456437-1|CAG30323.1|  863|Homo sapiens dJ1014D13.2 protein.          33   1.5  
AL022311-1|CAI18864.1|  863|Homo sapiens protein ( Human DNA seq...    33   1.5  
AJ496196-1|CAD42713.1|  863|Homo sapiens molecule interacting wi...    33   1.5  
CR456364-1|CAG30250.1|  948|Homo sapiens Em:AC016026.2 protein.        32   2.7  
AB037785-1|BAA92602.1|  811|Homo sapiens KIAA1364 protein protein.     32   2.7  

>CR457271-1|CAG33552.1|  344|Homo sapiens NAGK protein.
          Length = 344

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
 Frame = +1

Query: 103 LRVVCVGSVWNSWDVLKPGML------NELNAKKVKCELELVRLKVSSAMG 237
           L ++CVGSVW SW++LK G L       E+ A+       L++L+ SSA+G
Sbjct: 264 LPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALG 314


>BC005371-1|AAH05371.1|  344|Homo sapiens N-acetylglucosamine kinase
           protein.
          Length = 344

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
 Frame = +1

Query: 103 LRVVCVGSVWNSWDVLKPGML------NELNAKKVKCELELVRLKVSSAMG 237
           L ++CVGSVW SW++LK G L       E+ A+       L++L+ SSA+G
Sbjct: 264 LPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALG 314


>BC001029-1|AAH01029.1|  344|Homo sapiens N-acetylglucosamine kinase
           protein.
          Length = 344

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
 Frame = +1

Query: 103 LRVVCVGSVWNSWDVLKPGML------NELNAKKVKCELELVRLKVSSAMG 237
           L ++CVGSVW SW++LK G L       E+ A+       L++L+ SSA+G
Sbjct: 264 LPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALG 314


>AK222645-1|BAD96365.1|  344|Homo sapiens N-Acetylglucosamine kinase
           variant protein.
          Length = 344

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
 Frame = +1

Query: 103 LRVVCVGSVWNSWDVLKPGML------NELNAKKVKCELELVRLKVSSAMG 237
           L ++CVGSVW SW++LK G L       E+ A+       L++L+ SSA+G
Sbjct: 264 LPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALG 314


>AK001812-1|BAA91923.1|  344|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10950 fis, clone PLACE1000185. ).
          Length = 344

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
 Frame = +1

Query: 103 LRVVCVGSVWNSWDVLKPGML------NELNAKKVKCELELVRLKVSSAMG 237
           L ++CVGSVW SW++LK G L       E+ A+       L++L+ SSA+G
Sbjct: 264 LPILCVGSVWKSWELLKEGFLLVLTQGREIQAQNFFSSFTLMKLRHSSALG 314


>AJ242910-1|CAB61848.1|  344|Homo sapiens N-Acetylglucosamine kinase
           protein.
          Length = 344

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
 Frame = +1

Query: 103 LRVVCVGSVWNSWDVLKPGML------NELNAKKVKCELELVRLKVSSAMG 237
           L ++CVGSVW SW++LK G L       E+ A+       L++L+ SSA+G
Sbjct: 264 LPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALG 314


>AC007881-1|AAY14748.1|  344|Homo sapiens unknown protein.
          Length = 344

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
 Frame = +1

Query: 103 LRVVCVGSVWNSWDVLKPGML------NELNAKKVKCELELVRLKVSSAMG 237
           L ++CVGSVW SW++LK G L       E+ A+       L++L+ SSA+G
Sbjct: 264 LPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALG 314


>BC037988-1|AAH37988.1|  904|Homo sapiens MICAL-like 2 protein.
          Length = 904

 Score = 35.1 bits (77), Expect = 0.29
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 279 RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNL 380
           RD  AFC + H++RPD +N  A  K N   N  L
Sbjct: 31  RDGLAFCAILHRHRPDLINFSALKKENIYENNKL 64


>AK074068-1|BAB84894.1|  585|Homo sapiens FLJ00139 protein protein.
          Length = 585

 Score = 35.1 bits (77), Expect = 0.29
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 279 RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNL 380
           RD  AFC + H++RPD +N  A  K N   N  L
Sbjct: 44  RDGLAFCAILHRHRPDLINFSALKKENIYENNKL 77


>BC104036-1|AAI04037.1|  428|Homo sapiens ARL13B protein protein.
          Length = 428

 Score = 33.5 bits (73), Expect = 0.88
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +3

Query: 213 LKSIERNGSGLVGGNKINYDLPRDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNLNGVE 392
           + S+     G +   K N  + +D +  C + HK   + +    +V HNGQ N     VE
Sbjct: 260 IASVIIENEGKLEREKKNQKMEKDSDG-CHLKHKMEHEQIETQGQVNHNGQKNNEFGLVE 318

Query: 393 N 395
           N
Sbjct: 319 N 319


>BC104035-1|AAI04036.1|  428|Homo sapiens ARL13B protein protein.
          Length = 428

 Score = 33.5 bits (73), Expect = 0.88
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +3

Query: 213 LKSIERNGSGLVGGNKINYDLPRDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNLNGVE 392
           + S+     G +   K N  + +D +  C + HK   + +    +V HNGQ N     VE
Sbjct: 260 IASVIIENEGKLEREKKNQKMEKDSDG-CHLKHKMEHEQIETQGQVNHNGQKNNEFGLVE 318

Query: 393 N 395
           N
Sbjct: 319 N 319


>BC094725-1|AAH94725.1|  321|Homo sapiens ADP-ribosylation
           factor-like 13B protein.
          Length = 321

 Score = 33.5 bits (73), Expect = 0.88
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +3

Query: 213 LKSIERNGSGLVGGNKINYDLPRDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNLNGVE 392
           + S+     G +   K N  + +D +  C + HK   + +    +V HNGQ N     VE
Sbjct: 153 IASVIIENEGKLEREKKNQKMEKDSDG-CHLKHKMEHEQIETQGQVNHNGQKNNEFGLVE 211

Query: 393 N 395
           N
Sbjct: 212 N 212


>CR456437-1|CAG30323.1|  863|Homo sapiens dJ1014D13.2 protein.
          Length = 863

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 279 RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNL 380
           RD  AFC + H++RPD ++ D+  K N   N  L
Sbjct: 32  RDGLAFCAILHRHRPDLLDFDSLSKDNVFENNRL 65


>AL022311-1|CAI18864.1|  863|Homo sapiens protein ( Human DNA
           sequence from clone RP5-1014D13 on chromosome
           22q13.1-13.2.  ).
          Length = 863

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 279 RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNL 380
           RD  AFC + H++RPD ++ D+  K N   N  L
Sbjct: 32  RDGLAFCAILHRHRPDLLDFDSLSKDNVFENNRL 65


>AJ496196-1|CAD42713.1|  863|Homo sapiens molecule interacting with
           Rab13 protein.
          Length = 863

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 279 RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNL 380
           RD  AFC + H++RPD ++ D+  K N   N  L
Sbjct: 32  RDGLAFCAILHRHRPDLLDFDSLSKDNVFENNRL 65


>CR456364-1|CAG30250.1|  948|Homo sapiens Em:AC016026.2 protein.
          Length = 948

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +3

Query: 225 ERNGSGLVGGNKINYDLP-RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNL 380
           +R   G  G N  +  +  +   A C + H+YRPD ++ D+  + N + N  L
Sbjct: 529 QRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQL 581


>AB037785-1|BAA92602.1|  811|Homo sapiens KIAA1364 protein protein.
          Length = 811

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +3

Query: 225 ERNGSGLVGGNKINYDLP-RDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNL 380
           +R   G  G N  +  +  +   A C + H+YRPD ++ D+  + N + N  L
Sbjct: 364 QRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQL 416


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,750,539
Number of Sequences: 237096
Number of extensions: 2445839
Number of successful extensions: 8597
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8596
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)