Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1922
(773 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 150 2e-37
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 114 2e-26
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 97 2e-21
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 84 2e-17
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 81 2e-16
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 77 2e-15
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 63 5e-11
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 60 3e-10
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 59 8e-10
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 58 1e-09
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 57 2e-09
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 56 4e-09
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 52 9e-08
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 50 4e-07
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 48 1e-06
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 46 5e-06
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 45 1e-05
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 43 6e-05
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 42 7e-05
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 38 0.001
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 35 0.015
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 35 0.015
SPBC1683.11c |||isocitrate lyase|Schizosaccharomyces pombe|chr 2... 28 1.7
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 27 3.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.2
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 26 5.2
SPAC1F7.10 |||hydantoin racemase family |Schizosaccharomyces pom... 26 6.9
SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase |Schizosacchar... 25 9.1
SPAP8A3.06 |||U2AF small subunit, U2AF-23|Schizosaccharomyces po... 25 9.1
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 150 bits (364), Expect = 2e-37
Identities = 67/88 (76%), Positives = 78/88 (88%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKL 425
K+ IWDTAGQERFRTITSSYYRGAHGIIIVYD TDQDSF+NVKQWL+EIDRYA + VN+L
Sbjct: 58 KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRL 117
Query: 426 LVGNKCDLTTKKVVDFSTAKQYAEQLGI 509
LVGNK D+ KKVV++S AK++A+ L I
Sbjct: 118 LVGNKSDMVDKKVVEYSVAKEFADSLNI 145
Score = 121 bits (292), Expect = 1e-28
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +1
Query: 76 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQ 255
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT +L GKT+KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Score = 54.8 bits (126), Expect = 1e-08
Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +2
Query: 509 PFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGAAPA-GHVKIDQGQPLTPAS 667
PFLETSAK+STNVEQAF+TM+ +IK R+G + ++ A VK+ QG ++ +S
Sbjct: 146 PFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQGTNVSQSS 199
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 114 bits (274), Expect = 2e-26
Identities = 46/88 (52%), Positives = 67/88 (76%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKL 425
K+ IWDTAGQERFRTIT++YYRGA GI+++YD TD+ SF NV+ W ++++A +NV K+
Sbjct: 59 KLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKI 118
Query: 426 LVGNKCDLTTKKVVDFSTAKQYAEQLGI 509
L+GNKCD ++ V F + A++LG+
Sbjct: 119 LIGNKCDCEDQRQVSFEQGQALADELGV 146
Score = 98.3 bits (234), Expect = 1e-21
Identities = 43/56 (76%), Positives = 53/56 (94%)
Frame = +1
Query: 88 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQ 255
YDYL KLLLIGDSGVGKSCLLLRF++D++T S+I+TIG+DFKIRT++L+GK IKLQ
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQ 61
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 485 AICGTAGHPFLETSAKNSTNVEQAFMTMAAEIK 583
A+ G FLE SAK + NV++AF T+A EIK
Sbjct: 139 ALADELGVKFLEASAKTNVNVDEAFFTLAREIK 171
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 97.1 bits (231), Expect = 2e-21
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKL 425
K IWDTAGQER+R ITS+YYRGA G +IVYD T Q SF NV +WL+E+ +A N+ +
Sbjct: 60 KAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIM 119
Query: 426 LVGNKCDLTTKKVVDFSTAKQYAEQ 500
LVGNK DL + V A+ +A +
Sbjct: 120 LVGNKTDLLHLRAVSTEEAQAFAAE 144
Score = 66.9 bits (156), Expect = 3e-12
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1
Query: 85 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQ 255
EYDYLFK +LIGDSGVGKS LL+RF + + STIGV+F R + L+ K IK Q
Sbjct: 6 EYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Score = 33.1 bits (72), Expect = 0.045
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +2
Query: 512 FLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGAAPAGHVKIDQGQPLTPA 664
F+ETSA +++NVE+AF T+ EI V S A G V GQ L A
Sbjct: 149 FIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG-VHPTAGQTLNIA 198
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 83.8 bits (198), Expect = 2e-17
Identities = 35/85 (41%), Positives = 54/85 (63%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKL 425
K+ IWDTAGQE+FR++ +YYRGA G ++VYD T++DSF + WL +I A + +
Sbjct: 63 KLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVV 122
Query: 426 LVGNKCDLTTKKVVDFSTAKQYAEQ 500
L G+K DL ++ V A ++ +
Sbjct: 123 LAGSKSDLQNQRQVSTEEAAEFCSE 147
Score = 54.4 bits (125), Expect = 2e-08
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +1
Query: 88 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDL----NGKTIKLQ 255
YDYL K++L G SG GKSCLL RF + + + T+G+DF R + + K IKLQ
Sbjct: 6 YDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQ 65
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 80.6 bits (190), Expect = 2e-16
Identities = 38/88 (43%), Positives = 58/88 (65%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKL 425
++ +WDTAGQERFR++ SY R + IIVYD T+ +SF N ++W+E++ D+V +
Sbjct: 61 RLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIV 120
Query: 426 LVGNKCDLTTKKVVDFSTAKQYAEQLGI 509
LVGNK DL K+ V ++ A++L I
Sbjct: 121 LVGNKTDLADKRQVTQEEGEKKAKELKI 148
Score = 52.8 bits (121), Expect = 5e-08
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +1
Query: 100 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQ 255
FKL+ +G+ VGK+ L+ RF D + +Y +TIG+DF +T+ L +T++LQ
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQ 63
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 77.4 bits (182), Expect = 2e-15
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKL 425
K+ IWDTAGQER++++ YYR A+ I+VYD T S K W++E+ R A + +
Sbjct: 65 KLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIA 124
Query: 426 LVGNKCDLT-TKKVVDFSTAKQYAEQLGI 509
L GNK DL ++ V+ + A+ YA + +
Sbjct: 125 LAGNKLDLAQERRAVEKADAEAYAAEANL 153
Score = 46.8 bits (106), Expect = 3e-06
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +1
Query: 103 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKT-IKLQ 255
KL+L+GDS VGKS L+LRF D + + STIG F +T+ ++ T +KL+
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLE 67
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 62.9 bits (146), Expect = 5e-11
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 219 DCRLKWQDNKVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEID 395
DCR+ + ++ +WDTAGQE + + Y AH I++ + DS NV +W+EEI+
Sbjct: 48 DCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEIN 107
Query: 396 RYACDNVNKLLVGNKCDLTTKKV 464
C NV +LVG K DL + V
Sbjct: 108 T-LCPNVPFILVGMKADLRSDPV 129
Score = 29.9 bits (64), Expect = 0.42
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 103 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKL 252
KL+++GD GK+ LL F + Y+ T+ ++ + ++GK+++L
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQL 58
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 60.1 bits (139), Expect = 3e-10
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +3
Query: 222 CRLKWQDNKVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRY 401
C + + + + DTAGQE + + Y R G ++VY+ T + SF + + ++I R
Sbjct: 49 CEIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRV 108
Query: 402 A-CDNVNKLLVGNKCDLTTKKVVDFSTAKQYAEQL 503
D +LV NKCDL ++VV + +Q A+ +
Sbjct: 109 KDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSM 143
Score = 35.5 bits (78), Expect = 0.009
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +1
Query: 76 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQ 255
M Y +KL+++GD GVGKS L ++ + + Y TI ++ + +++G+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLD 59
Query: 256 YGTQLDRSGLE 288
LD +G E
Sbjct: 60 V---LDTAGQE 67
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 512 FLETSAKNSTNVEQAFMTMAAEIK 583
++ETSAK NVE+AF ++ I+
Sbjct: 147 YVETSAKLRLNVEEAFYSLVRTIR 170
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 58.8 bits (136), Expect = 8e-10
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Frame = +3
Query: 240 DNKVT---IWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC- 407
D+KV +WDTAGQERF+++ ++YRGA ++VYD + SF + W +E A
Sbjct: 53 DDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASP 112
Query: 408 ---DNVNKLLVGNKCDL-TTKKVVDFSTAKQYAEQLG 506
+ +L+GNK D+ K++V S A + + G
Sbjct: 113 SNPETFPFILLGNKVDVEEQKRMVSKSKALAFCQARG 149
Score = 46.8 bits (106), Expect = 3e-06
Identities = 18/54 (33%), Positives = 38/54 (70%)
Frame = +1
Query: 94 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQ 255
+L K++++G+SGVGK+ ++ ++ + +++ Y +TIG DF + V ++ K + LQ
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Score = 32.3 bits (70), Expect = 0.079
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 485 AICGTAGH-PFLETSAKNSTNVEQAFMTMA 571
A C G P+ ETSAK + NV++AF T+A
Sbjct: 143 AFCQARGEIPYFETSAKEAINVQEAFETVA 172
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 58.0 bits (134), Expect = 1e-09
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +3
Query: 255 IWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVG 434
+WDTAGQE+ + YY II++D T + ++ NV W ++ R C+N+ +L G
Sbjct: 62 VWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVR-VCENIPIVLCG 120
Query: 435 NKCDLTTKKV 464
NK D+ +KV
Sbjct: 121 NKVDVKERKV 130
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 100 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVD 207
FKL+L+GD G GK+ + R + + YI+T+GV+
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE 45
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 57.2 bits (132), Expect = 2e-09
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +3
Query: 255 IWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDN---VNKL 425
+WDTAGQERF+++ ++YRGA +IVY+ + SF +V+ W +E + +
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFI 120
Query: 426 LVGNKCDL-TTKKVVDFSTAKQYAE 497
+VGN+ D +K+ V A Y +
Sbjct: 121 IVGNQIDKDASKRAVSLHRALDYCK 145
Score = 52.8 bits (121), Expect = 5e-08
Identities = 22/60 (36%), Positives = 39/60 (65%)
Frame = +1
Query: 76 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQ 255
M+ + K++++GDSGVGK+CL+ +F + ++ Y +TIG DF + V ++ K + LQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 56.4 bits (130), Expect = 4e-09
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEEIDRYACDNVNK 422
++++WDTAGQE + + S Y H I+I + +DS NV +WL E+ C V
Sbjct: 62 ELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSS-NCPGVKL 120
Query: 423 LLVGNKCDL--TTKKVVDFSTAKQYAEQL 503
+LV KCDL ++ VD S Y E L
Sbjct: 121 VLVALKCDLRGADEEQVDHSKIIDYEEGL 149
Score = 29.1 bits (62), Expect = 0.74
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 103 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKL 252
K++++GD GK+ LL F + + Y TI ++ I + ++G +I+L
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIEL 63
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 52.0 bits (119), Expect = 9e-08
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +3
Query: 225 RLKWQDNKVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEI-DRY 401
+ K Q+ I DTAGQ+ + + S + G HG ++VY T + SF VK ++I +
Sbjct: 48 KYKGQEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHT 107
Query: 402 ACDNVNKLLVGNKCDLTTKKVVDFSTAKQYAEQ 500
+ V ++VGNK DL ++ V K A +
Sbjct: 108 GTEWVPIVVVGNKSDLHMQRAVTAEEGKALANE 140
Score = 29.9 bits (64), Expect = 0.42
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 103 KLLLIGDSGVGKSCLLLRFADDTYTESYISTI 198
++ ++G VGKS L +++ ++ + ESY TI
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTI 39
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 50.0 bits (114), Expect = 4e-07
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACDNVNK 422
++ +WDTAGQE + + Y +H ++I + +S NV++ W+ E+ + C N+
Sbjct: 55 ELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHF-CSNLPI 113
Query: 423 LLVGNKCDLTT--KKVVDFSTAKQ 488
LLVG K DL K + + S Q
Sbjct: 114 LLVGCKVDLRNDPKTIEELSKTSQ 137
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/50 (36%), Positives = 35/50 (70%)
Frame = +1
Query: 103 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKL 252
KL+++GD GK+CLL+ F+ T+ E Y+ T+ ++ + V+++G+ I+L
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIEL 56
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 48.0 bits (109), Expect = 1e-06
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACDNVNK 422
++ +WDTAGQE + + Y +H I+I + DS NV++ W+ E+ + C ++
Sbjct: 55 ELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHF-CSSLPI 113
Query: 423 LLVGNKCDLTT--KKVVDFSTAKQY 491
LLV K DL K + + S Q+
Sbjct: 114 LLVACKADLRNDPKIIEELSKTNQH 138
Score = 43.2 bits (97), Expect = 4e-05
Identities = 17/50 (34%), Positives = 35/50 (70%)
Frame = +1
Query: 103 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKL 252
KL+++GD GK+CLL+ F+ T+ E Y+ T+ ++ + V+++G+ ++L
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVEL 56
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 46.4 bits (105), Expect = 5e-06
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 234 WQDNKVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEI--DRYAC 407
+++ K +WD GQ++ R + Y+ G G+I V D D + S +Q L I DR
Sbjct: 62 YKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMR 121
Query: 408 DNVNKLLVGNKCDL 449
D + L++ NK DL
Sbjct: 122 DCL-LLVLANKQDL 134
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 44.8 bits (101), Expect = 1e-05
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 IWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACDNVNKLLV 431
++DTAGQE + + Y ++ + T SF NVK+ W E+ + C V L+V
Sbjct: 55 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHH-CPGVPCLIV 113
Query: 432 GNKCDLTTKKVVDFSTAKQYAEQL 503
G + DL V A+Q+ L
Sbjct: 114 GTQIDLRDDPSVQQKLARQHQHPL 137
Score = 34.7 bits (76), Expect = 0.015
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 103 KLLLIGDSGVGKSCLLLRFADDTYTESYISTI 198
K +++GD VGK+CLL+ + + + Y+ T+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV 36
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 228 LKWQDNKVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEE-IDRYA 404
+++++ T+WD GQ++ R + Y++ GII V D D++ S + L+ ++
Sbjct: 56 VEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDE 115
Query: 405 CDNVNKLLVGNKCDL 449
+ L+ NK DL
Sbjct: 116 LRDALLLVFANKQDL 130
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 42.3 bits (95), Expect = 7e-05
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 103 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIR-TVDLNGKTIKL 252
KL+++GD G GK+CLL+ F+ T+ E Y+ T+ ++ T N K I+L
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIEL 66
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEEIDRYACDNVNK 422
++ +WDTAGQE + + Y ++ I++ + S +NV ++W E+ + C
Sbjct: 65 ELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHF-CPRTPI 123
Query: 423 LLVGNKCDL 449
+LVG K DL
Sbjct: 124 VLVGLKADL 132
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +1
Query: 103 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTI 246
K+ +IGDS +GK+ L++ + ++ E T+GV+F +T+ + I
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEI 59
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 34.7 bits (76), Expect = 0.015
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEE-IDRYACDNVNK 422
+ T +D G ++ R + Y+ +GI+ + DC D + S K L+ + V
Sbjct: 65 RFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPF 124
Query: 423 LLVGNKCD 446
L++GNK D
Sbjct: 125 LILGNKID 132
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 34.7 bits (76), Expect = 0.015
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 246 KVTIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEI 392
+ TIWD GQ+ R +Y+ II V D D + L+E+
Sbjct: 61 RFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQEL 109
>SPBC1683.11c |||isocitrate lyase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 518
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 82 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVD 207
P+YDYL ++ GD G G ++ + ES ++ I +D
Sbjct: 157 PKYDYLLPIIADGDMGFGSVTSTMKMT-KRFVESGVAMIHLD 197
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 100 FKLLLIGDSGVGKSCLLLRFAD-DTYTESYISTIGVDFKIR---TVDLNGKTIKL 252
F +L++G+SG GKS L+ + D Y + S G DF + TV +N +++
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTG-DFGVNPEPTVMINSSAVEI 149
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 109 LLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGK 240
+L+GD+ GK+C+L A + I + V+ T+DL G+
Sbjct: 1873 ILVGDTATGKTCILRLLA--AIAGAKIKEMAVNSDTDTMDLIGE 1914
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -1
Query: 179 SVYVSSANLSNRHDFP--TPESPI 114
S Y SANL+NR +P TPE+ +
Sbjct: 179 SFYADSANLTNREPYPAWTPENEL 202
>SPAC1F7.10 |||hydantoin racemase family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 238
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 618 GAAPVE-GGPTRALISAAIVMNACSTFVEFFADVSRNGCPAVPHIA 484
G AP+E RA + A + A E ADV GC + H+A
Sbjct: 147 GLAPLELDSKPRAEVDALLARTALRAVNEMGADVICLGCAGMTHMA 192
>SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 599 PSTGAAPAGHVKIDQGQPLTPASPRAAEYC 688
PS+ +P+ +D+ +PL SPR + C
Sbjct: 39 PSSLTSPSSSTSVDKKKPLFTKSPRNSASC 68
>SPAP8A3.06 |||U2AF small subunit, U2AF-23|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 216
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +3
Query: 336 YDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGN-----KCDLTTKKVVDFSTAKQYAEQ 500
+D +D F ++ E CDNV LVGN K + + + +D ++ Y+++
Sbjct: 73 FDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYEESAQNAIDDLNSRWYSQR 132
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,846,626
Number of Sequences: 5004
Number of extensions: 55727
Number of successful extensions: 219
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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