Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1922
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   2.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.6  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +2

Query: 587 RVGPPSTGAAPAGHVKIDQGQPLTP 661
           R   PS G    GH     G P TP
Sbjct: 111 RSASPSPGMGHMGHTPTPNGHPSTP 135


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 354 DSFSNVKQWLEEIDRYACDN 413
           +++  VK+W + +D YA +N
Sbjct: 270 ETYELVKEWRDFVDNYAEEN 289


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +1

Query: 484  SNMRNS--WASVPRDVSEELYE 543
            SN R +   + VPRDVSE +Y+
Sbjct: 1254 SNSRGAAQMSKVPRDVSEGIYD 1275


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 659 PASPRAAEYCLLTHERACVTRG*RQTRT 742
           P+S       + +H+++C+ R  R+T+T
Sbjct: 277 PSSTSKKSGIVRSHQQSCINRVARETKT 304


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 181 SRCTYHQRILATDMISQLQSHQSGV 107
           S C     I +TD+I   Q H  GV
Sbjct: 520 SACRPRHEIRSTDVIPGTQEHVCGV 544


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,587
Number of Sequences: 438
Number of extensions: 3691
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)