Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1920
         (786 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    27   0.87 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   3.5  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    24   4.6  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         24   4.6  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   6.1  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   6.1  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 26.6 bits (56), Expect = 0.87
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -1

Query: 756 SGRQRLGSAPGIAEVHGRR*P 694
           +GR R G  PG AE H RR P
Sbjct: 318 AGRLRTGPVPGAAERHRRRRP 338


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 535  TAPTCPCAPGNRRQAKRLIFETCEFS 612
            ++P CP  PG R  A+  +F    F+
Sbjct: 956  SSPDCPNCPGVRESAEHAMFACLRFA 981


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 676 DPPDGEWLPSPMDFSNARGRSKP 744
           D  DGEW P  +D    +G  KP
Sbjct: 252 DEMDGEWEPPMIDNPEYKGEWKP 274


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +1

Query: 469 CACLLTVVSGMLCVRTERLRPWTAPTCPCAPGNRRQAKRLIFETCEFSSSNIRKLWRFFF 648
           CA      S    + T R R W  P   C P +RR    +I  +   SSS+ ++     F
Sbjct: 5   CAWRCARASPSRPILTTRGRRWPRPPTSCWP-SRRSRLCIIALSLTLSSSSCKQSTSLSF 63

Query: 649 IVL 657
           + L
Sbjct: 64  VFL 66


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 502 LCVRTERLRPWTAPTCPCAPGN 567
           +C + E    WT P C C   N
Sbjct: 612 VCGQCECREGWTGPACDCRASN 633


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 496  GMLCVRTERLRPWTAPTCPCAPGNRRQAKRLIFETCEFS 612
            G L     ++R  ++P CP  PG     + ++FE   F+
Sbjct: 939  GFLREYLNKMRFTSSPACPRCPGVVEGVEHVMFECPRFA 977


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,559
Number of Sequences: 2352
Number of extensions: 18572
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)