Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1918
         (794 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023708-1|AAY85108.1|  936|Drosophila melanogaster IP01262p pro...    35   0.15 
BT023705-1|AAY85105.1|  936|Drosophila melanogaster IP01263p pro...    35   0.15 
BT022176-1|AAY51570.1|  936|Drosophila melanogaster IP01261p pro...    35   0.15 
BT016102-1|AAV36987.1|  936|Drosophila melanogaster LD23980p pro...    35   0.15 
AE014297-1352|AAF54675.1|  936|Drosophila melanogaster CG18476-P...    35   0.15 
AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA...    29   7.3  

>BT023708-1|AAY85108.1|  936|Drosophila melanogaster IP01262p
           protein.
          Length = 936

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 14/72 (19%), Positives = 33/72 (45%)
 Frame = +3

Query: 387 IYNLKYRKYNC*RCRISYKQHSQLQSQSDLNMKNQENHNTTTHRKRSFTSFTCTKLHAHR 566
           ++  + R Y+C  C   + +   L++   ++  ++ + N + H+K         K H ++
Sbjct: 226 VHKPETRLYDCSLCIRKFSRSEALEAHLKIHRNSKRSANISEHKKAKAVDLNLCKPHGYK 285

Query: 567 FIIARICRRAYD 602
            I   IC+  Y+
Sbjct: 286 LIECMICQSQYN 297


>BT023705-1|AAY85105.1|  936|Drosophila melanogaster IP01263p
           protein.
          Length = 936

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 14/72 (19%), Positives = 33/72 (45%)
 Frame = +3

Query: 387 IYNLKYRKYNC*RCRISYKQHSQLQSQSDLNMKNQENHNTTTHRKRSFTSFTCTKLHAHR 566
           ++  + R Y+C  C   + +   L++   ++  ++ + N + H+K         K H ++
Sbjct: 226 VHKPETRLYDCSLCIRKFSRSEALEAHLKIHRNSKRSANISEHKKAKAVGLNLCKPHGYK 285

Query: 567 FIIARICRRAYD 602
            I   IC+  Y+
Sbjct: 286 LIECMICQSQYN 297


>BT022176-1|AAY51570.1|  936|Drosophila melanogaster IP01261p
           protein.
          Length = 936

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 14/72 (19%), Positives = 33/72 (45%)
 Frame = +3

Query: 387 IYNLKYRKYNC*RCRISYKQHSQLQSQSDLNMKNQENHNTTTHRKRSFTSFTCTKLHAHR 566
           ++  + R Y+C  C   + +   L++   ++  ++ + N + H+K         K H ++
Sbjct: 226 VHKPETRLYDCSLCIRKFSRSEALEAHLKIHRNSKRSANISEHKKAKAVDLNLCKPHGYK 285

Query: 567 FIIARICRRAYD 602
            I   IC+  Y+
Sbjct: 286 LIECMICQSQYN 297


>BT016102-1|AAV36987.1|  936|Drosophila melanogaster LD23980p
           protein.
          Length = 936

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 14/72 (19%), Positives = 33/72 (45%)
 Frame = +3

Query: 387 IYNLKYRKYNC*RCRISYKQHSQLQSQSDLNMKNQENHNTTTHRKRSFTSFTCTKLHAHR 566
           ++  + R Y+C  C   + +   L++   ++  ++ + N + H+K         K H ++
Sbjct: 226 VHKPETRLYDCSLCIRKFSRSEALEAHLKIHRNSKRSANISEHKKAKAVDLNLCKPHGYK 285

Query: 567 FIIARICRRAYD 602
            I   IC+  Y+
Sbjct: 286 LIECMICQSQYN 297


>AE014297-1352|AAF54675.1|  936|Drosophila melanogaster CG18476-PA
           protein.
          Length = 936

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 14/72 (19%), Positives = 33/72 (45%)
 Frame = +3

Query: 387 IYNLKYRKYNC*RCRISYKQHSQLQSQSDLNMKNQENHNTTTHRKRSFTSFTCTKLHAHR 566
           ++  + R Y+C  C   + +   L++   ++  ++ + N + H+K         K H ++
Sbjct: 226 VHKPETRLYDCSLCIRKFSRSEALEAHLKIHRNSKRSANISEHKKAKAVDLNLCKPHGYK 285

Query: 567 FIIARICRRAYD 602
            I   IC+  Y+
Sbjct: 286 LIECMICQSQYN 297


>AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA
           protein.
          Length = 1998

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 453 QLQSQSDLNMKNQENHNTTTHRKRSFTSFTCTKLHAH 563
           QL  Q   + ++Q+NH++ T  +    S T + LH+H
Sbjct: 519 QLLQQQQQHHQSQQNHHSATATRSHSISSTASSLHSH 555


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,269,419
Number of Sequences: 53049
Number of extensions: 697660
Number of successful extensions: 1682
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1681
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)