Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1915
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding pr...    25   3.1  
AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding pr...    25   3.1  
AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding pr...    24   4.1  

>AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding
           protein AgamOBP30 protein.
          Length = 289

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 349 EHRNQI*SIYYIRMICCSLVSLKLENR-WTDLANFGPELFVEVQRRF*RYINMKSSELNK 525
           +H     ++YY+ ++C   V+    ++ + D      +  V+ Q    RY+ +  + L  
Sbjct: 14  QHTMATVNLYYLGLVCLLAVTATAASQCFRDAGQL--KRVVQAQEECVRYLRIPCARLAV 71

Query: 526 NNHFVFP 546
            N F++P
Sbjct: 72  YNKFIYP 78


>AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 289

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 349 EHRNQI*SIYYIRMICCSLVSLKLENR-WTDLANFGPELFVEVQRRF*RYINMKSSELNK 525
           +H     ++YY+ ++C   V+    ++ + D      +  V+ Q    RY+ +  + L  
Sbjct: 14  QHTMATVNLYYLGLVCLLAVTATAASQCFRDAGQL--KRVVQAQEECVRYLRIPCARLAV 71

Query: 526 NNHFVFP 546
            N F++P
Sbjct: 72  YNKFIYP 78


>AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding
           protein OBPjj83c protein.
          Length = 273

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 370 SIYYIRMICCSLVSLKLENR-WTDLANFGPELFVEVQRRF*RYINMKSSELNKNNHFVFP 546
           ++YY+ ++C   V+    ++ + D      +  V+ Q    RY+ +  + L   N F++P
Sbjct: 5   NLYYLGLVCLLAVTATAASQCFRDAGQL--KRVVQAQEECVRYLRIPCARLAVYNKFIYP 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,957
Number of Sequences: 2352
Number of extensions: 12795
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)