Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1915
         (710 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035416-1|AAH35416.1|  244|Homo sapiens UL16 binding protein 1 ...    30   7.1  
AL355497-1|CAH74121.1|  244|Homo sapiens UL16 binding protein 1 ...    30   7.1  
AF425265-1|AAN32759.1|  239|Homo sapiens UL16 binding protein 1 ...    30   7.1  
AF346595-1|AAN40838.1|  234|Homo sapiens NKG2D ligand 1 protein.       30   7.1  
AF346416-1|AAL76416.1|  244|Homo sapiens retinoic acid early tra...    30   7.1  
AF304377-1|AAK13081.1|  244|Homo sapiens ULBP1 protein protein.        30   7.1  
AB052907-1|BAB61049.1|  244|Homo sapiens ALCAN-beta protein.           30   7.1  

>BC035416-1|AAH35416.1|  244|Homo sapiens UL16 binding protein 1
           protein.
          Length = 244

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 566 ESVRHIKGKTKWLFLFNSELFIFIYL*NLLWTSTNNSGPKLAKSVQR 426
           E   H  G+  W FLFN + F+     N  WT+ +    K+ +  ++
Sbjct: 128 EHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEK 174


>AL355497-1|CAH74121.1|  244|Homo sapiens UL16 binding protein 1
           protein.
          Length = 244

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 566 ESVRHIKGKTKWLFLFNSELFIFIYL*NLLWTSTNNSGPKLAKSVQR 426
           E   H  G+  W FLFN + F+     N  WT+ +    K+ +  ++
Sbjct: 128 EHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEK 174


>AF425265-1|AAN32759.1|  239|Homo sapiens UL16 binding protein 1
           protein.
          Length = 239

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 566 ESVRHIKGKTKWLFLFNSELFIFIYL*NLLWTSTNNSGPKLAKSVQR 426
           E   H  G+  W FLFN + F+     N  WT+ +    K+ +  ++
Sbjct: 123 EHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEK 169


>AF346595-1|AAN40838.1|  234|Homo sapiens NKG2D ligand 1 protein.
          Length = 234

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 566 ESVRHIKGKTKWLFLFNSELFIFIYL*NLLWTSTNNSGPKLAKSVQR 426
           E   H  G+  W FLFN + F+     N  WT+ +    K+ +  ++
Sbjct: 118 EHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEK 164


>AF346416-1|AAL76416.1|  244|Homo sapiens retinoic acid early
           transcript 1 protein.
          Length = 244

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 566 ESVRHIKGKTKWLFLFNSELFIFIYL*NLLWTSTNNSGPKLAKSVQR 426
           E   H  G+  W FLFN + F+     N  WT+ +    K+ +  ++
Sbjct: 128 EHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEK 174


>AF304377-1|AAK13081.1|  244|Homo sapiens ULBP1 protein protein.
          Length = 244

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 566 ESVRHIKGKTKWLFLFNSELFIFIYL*NLLWTSTNNSGPKLAKSVQR 426
           E   H  G+  W FLFN + F+     N  WT+ +    K+ +  ++
Sbjct: 128 EHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEK 174


>AB052907-1|BAB61049.1|  244|Homo sapiens ALCAN-beta protein.
          Length = 244

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 566 ESVRHIKGKTKWLFLFNSELFIFIYL*NLLWTSTNNSGPKLAKSVQR 426
           E   H  G+  W FLFN + F+     N  WT+ +    K+ +  ++
Sbjct: 128 EHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEK 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,180,815
Number of Sequences: 237096
Number of extensions: 1731152
Number of successful extensions: 2401
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2401
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)