Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1914X
         (613 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9WPZ7 Cluster: ORF1ab replicase polyprotein; n=3; Gill...    33   7.1  
UniRef50_Q86917 Cluster: G-protein coupled receptor homolog Q2/3...    33   7.1  

>UniRef50_Q9WPZ7 Cluster: ORF1ab replicase polyprotein; n=3;
           Gill-associated virus|Rep: ORF1ab replicase polyprotein
           - Gill-associated virus
          Length = 2646

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -1

Query: 193 KYNDINEVKVSK*FWLTYP-SNRKGCLLRHKKKIGVGYSCVLSIHSYYLPLITQFSFCLF 17
           KY +   +KVSK  WL     N K C +         Y+C    HS+ L   + ++F + 
Sbjct: 164 KYTNERNIKVSKTTWLCKNICNHKSCNILKMDIFDYTYTCYTKAHSFALQACSTYNFDIT 223

Query: 16  DFLIC 2
              IC
Sbjct: 224 PDNIC 228


>UniRef50_Q86917 Cluster: G-protein coupled receptor homolog Q2/3L;
           n=7; Capripoxvirus|Rep: G-protein coupled receptor
           homolog Q2/3L - Sheeppox virus (strain KS-1)
           (Capripoxvirus (strain KS-1))
          Length = 381

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 21/78 (26%), Positives = 38/78 (48%)
 Frame = -2

Query: 582 TNRSGGRSSCTLIYINNAKKTRKAFNKEVNSEQ**VVLNYIMFCNNSPFAIRQAVIISLN 403
           T +  G + C + Y +NAK  +   N E+N     + L  +++C    + I   +  S  
Sbjct: 230 TKKVYGITYCHVFYNDNAKIWKLFINFEINIFGMIIPLTILLYCY---YKILNTLKTSQT 286

Query: 402 KNKQPVKC*FMLIFTRVL 349
           KNK+ +K  F+++   VL
Sbjct: 287 KNKKAIKMVFLIVICSVL 304


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,910,573
Number of Sequences: 1657284
Number of extensions: 9781892
Number of successful extensions: 17471
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17471
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)