Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1914X
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089560-1|AAL90298.1| 1102|Drosophila melanogaster LP04725p pro...    29   6.5  
AF129814-1|AAD18071.1|  752|Drosophila melanogaster carbamyl pho...    29   6.5  
AE014298-2442|AAS65389.1| 1387|Drosophila melanogaster CG18572-P...    29   6.5  
AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-P...    29   6.5  
BT025128-1|ABE73299.1|  416|Drosophila melanogaster IP08460p pro...    28   8.6  
AY070497-1|AAL47968.1|  617|Drosophila melanogaster GH07338p pro...    28   8.6  
AE014296-954|AAF50779.1|  288|Drosophila melanogaster CG15214-PA...    28   8.6  
AE013599-697|AAF59056.1|  582|Drosophila melanogaster CG12376-PA...    28   8.6  

>AY089560-1|AAL90298.1| 1102|Drosophila melanogaster LP04725p
           protein.
          Length = 1102

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +1

Query: 310 IMIHNTPEITSVLEDSCKYQHKLTFHWLFVLIQGDYYCLSDSEGRIIAKHDIIQNNLSL 486
           IMI+  PE  S   D C    +L F  +   +  D Y + +SEG I++    + NN+++
Sbjct: 699 IMINYNPETVSTDYDMCD---RLYFEEISFEVVMDIYEMENSEGIILSMGGQLPNNIAM 754


>AF129814-1|AAD18071.1|  752|Drosophila melanogaster carbamyl
           phosphate synthetase II protein.
          Length = 752

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +1

Query: 310 IMIHNTPEITSVLEDSCKYQHKLTFHWLFVLIQGDYYCLSDSEGRIIAKHDIIQNNLSL 486
           IMI+  PE  S   D C    +L F  +   +  D Y + +SEG I++    + NN+++
Sbjct: 87  IMINYNPETVSTDYDMCD---RLYFEEISFEVVMDIYEMENSEGIILSMGGQLPNNIAM 142


>AE014298-2442|AAS65389.1| 1387|Drosophila melanogaster CG18572-PB,
            isoform B protein.
          Length = 1387

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +1

Query: 310  IMIHNTPEITSVLEDSCKYQHKLTFHWLFVLIQGDYYCLSDSEGRIIAKHDIIQNNLSL 486
            IMI+  PE  S   D C    +L F  +   +  D Y + +SEG I++    + NN+++
Sbjct: 984  IMINYNPETVSTDYDMCD---RLYFEEISFEVVMDIYEMENSEGIILSMGGQLPNNIAM 1039


>AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-PA,
            isoform A protein.
          Length = 2224

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +1

Query: 310  IMIHNTPEITSVLEDSCKYQHKLTFHWLFVLIQGDYYCLSDSEGRIIAKHDIIQNNLSL 486
            IMI+  PE  S   D C    +L F  +   +  D Y + +SEG I++    + NN+++
Sbjct: 984  IMINYNPETVSTDYDMCD---RLYFEEISFEVVMDIYEMENSEGIILSMGGQLPNNIAM 1039


>BT025128-1|ABE73299.1|  416|Drosophila melanogaster IP08460p
           protein.
          Length = 416

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 253 TIDINTE-HAYIVLY-VYA*VIMIHNTPEITSVLEDSCKYQHKLTFHWLFVLIQGDYYCL 426
           TID +TE H   ++Y VY  V+++ +    T   E+S +   KLT   L     G+Y C+
Sbjct: 207 TIDCHTEAHPKAIIYWVYNSVMVLPSKKYKTDYTENSYRAHMKLTIRNLQYGDFGNYRCI 266

Query: 427 S 429
           S
Sbjct: 267 S 267


>AY070497-1|AAL47968.1|  617|Drosophila melanogaster GH07338p
           protein.
          Length = 617

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 345 NRGDFWGIMYHDDLGIYI*YYIGVFSVNVYCMY 247
           N G F  +++   LG +    +G+FS+  YC+Y
Sbjct: 557 NLGVFSTLLWSTTLGFFARRSVGIFSIVFYCIY 589


>AE014296-954|AAF50779.1|  288|Drosophila melanogaster CG15214-PA
           protein.
          Length = 288

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 253 TIDINTE-HAYIVLY-VYA*VIMIHNTPEITSVLEDSCKYQHKLTFHWLFVLIQGDYYCL 426
           TID +TE H   ++Y VY  V+++ +    T   E+S +   KLT   L     G+Y C+
Sbjct: 18  TIDCHTEAHPKAIIYWVYNSVMVLPSKKYKTDYTENSYRAHMKLTIRNLQYGDFGNYRCI 77

Query: 427 S 429
           S
Sbjct: 78  S 78


>AE013599-697|AAF59056.1|  582|Drosophila melanogaster CG12376-PA
           protein.
          Length = 582

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 345 NRGDFWGIMYHDDLGIYI*YYIGVFSVNVYCMY 247
           N G F  +++   LG +    +G+FS+  YC+Y
Sbjct: 522 NLGVFSTLLWSTTLGFFARRSVGIFSIVFYCIY 554


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,997,173
Number of Sequences: 53049
Number of extensions: 442114
Number of successful extensions: 721
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)