Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1912
         (778 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55776-1|AAC47406.1| 1851|Drosophila melanogaster calcium channe...    29   5.4  
AE014298-1724|AAS65323.1| 1851|Drosophila melanogaster CG1522-PE...    29   5.4  
AE014298-1723|AAX52487.1| 1850|Drosophila melanogaster CG1522-PI...    29   5.4  
AE014298-1722|AAX52486.1| 1849|Drosophila melanogaster CG1522-PH...    29   5.4  
AE014298-1721|AAF48120.2| 1848|Drosophila melanogaster CG1522-PA...    29   5.4  
AE014298-1720|AAS65322.1| 1848|Drosophila melanogaster CG1522-PC...    29   5.4  

>U55776-1|AAC47406.1| 1851|Drosophila melanogaster calcium channel
           alpha-1 subunit protein.
          Length = 1851

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 125 AYFLYHRC---QTKIQAIYQSLFKHCLCRNIKNMILWFITLEGF 3
           AYFL   C     KI A+   L KH   RNI N++ +F+ + GF
Sbjct: 78  AYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGF 121


>AE014298-1724|AAS65323.1| 1851|Drosophila melanogaster CG1522-PE,
           isoform E protein.
          Length = 1851

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 125 AYFLYHRC---QTKIQAIYQSLFKHCLCRNIKNMILWFITLEGF 3
           AYFL   C     KI A+   L KH   RNI N++ +F+ + GF
Sbjct: 78  AYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGF 121


>AE014298-1723|AAX52487.1| 1850|Drosophila melanogaster CG1522-PI,
           isoform I protein.
          Length = 1850

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 125 AYFLYHRC---QTKIQAIYQSLFKHCLCRNIKNMILWFITLEGF 3
           AYFL   C     KI A+   L KH   RNI N++ +F+ + GF
Sbjct: 78  AYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGF 121


>AE014298-1722|AAX52486.1| 1849|Drosophila melanogaster CG1522-PH,
           isoform H protein.
          Length = 1849

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 125 AYFLYHRC---QTKIQAIYQSLFKHCLCRNIKNMILWFITLEGF 3
           AYFL   C     KI A+   L KH   RNI N++ +F+ + GF
Sbjct: 78  AYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGF 121


>AE014298-1721|AAF48120.2| 1848|Drosophila melanogaster CG1522-PA,
           isoform A protein.
          Length = 1848

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 125 AYFLYHRC---QTKIQAIYQSLFKHCLCRNIKNMILWFITLEGF 3
           AYFL   C     KI A+   L KH   RNI N++ +F+ + GF
Sbjct: 78  AYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGF 121


>AE014298-1720|AAS65322.1| 1848|Drosophila melanogaster CG1522-PC,
           isoform C protein.
          Length = 1848

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 125 AYFLYHRC---QTKIQAIYQSLFKHCLCRNIKNMILWFITLEGF 3
           AYFL   C     KI A+   L KH   RNI N++ +F+ + GF
Sbjct: 78  AYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGF 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,550,876
Number of Sequences: 53049
Number of extensions: 761336
Number of successful extensions: 1575
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)