Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1909
         (619 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.5  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   4.5  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   4.5  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   4.5  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    24   4.5  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   7.9  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +3

Query: 426  EGSRMAMRCHREHGLYSFCETSSVDSDLTATNYAIVGL--TRAYGVQYHV 569
            +G+R A+  H  H L+  C  SSV   +   + A V       Y V Y V
Sbjct: 1862 DGTRSAIHMHAAHSLFPSCLCSSVMQIVACLDDAAVNSDGCAVYEVAYQV 1911


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 83  LITGAASGIGLAYSEELLKQGAKVSLCD 166
           ++ G  SG GLA +++ ++ GAKV++ D
Sbjct: 41  VVIGGGSG-GLACAKQAVQLGAKVAVLD 67


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 83  LITGAASGIGLAYSEELLKQGAKVSLCD 166
           ++ G  SG GLA +++ ++ GAKV++ D
Sbjct: 17  VVIGGGSG-GLACAKQAVQLGAKVAVLD 43


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 83  LITGAASGIGLAYSEELLKQGAKVSLCD 166
           ++ G  SG GLA +++ ++ GAKV++ D
Sbjct: 14  VVIGGGSG-GLACAKQAVQLGAKVAVLD 40


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 420 YGEGSRMAMRCHREHGL 470
           YG+GSR    C   HG+
Sbjct: 14  YGQGSRFWRACSNNHGM 30


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 498 DSDLTATNYAIVGLTRAYGVQYHVNMTGV 584
           D D+T  NYA+ GL        H N  G+
Sbjct: 163 DLDMTGLNYAVFGLGNK--TYEHYNKVGI 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,108
Number of Sequences: 2352
Number of extensions: 13047
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)