Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1907
(779 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY563507-1|AAT67985.1| 1516|Homo sapiens KIAA2022 protein. 31 4.7
AL139395-1|CAI39510.1| 1516|Homo sapiens novel protein protein. 31 4.7
AB095942-1|BAC23118.1| 1520|Homo sapiens KIAA2022 protein protein. 31 4.7
BC141815-1|AAI41816.1| 647|Homo sapiens Wolf-Hirschhorn syndrom... 30 8.1
BC070176-1|AAH70176.1| 152|Homo sapiens WHSC1 protein protein. 30 8.1
AL132868-5|CAM15222.1| 647|Homo sapiens Wolf-Hirschhorn syndrom... 30 8.1
AF178206-1|AAF23369.1| 647|Homo sapiens MMSET type I protein. 30 8.1
AF083390-1|AAD19345.1| 647|Homo sapiens putative WHSC1 protein ... 30 8.1
AF083389-1|AAD19344.1| 647|Homo sapiens putative WHSC1 protein ... 30 8.1
AF071594-1|AAC24151.1| 647|Homo sapiens MMSET type I protein. 30 8.1
>AY563507-1|AAT67985.1| 1516|Homo sapiens KIAA2022 protein.
Length = 1516
Score = 31.1 bits (67), Expect = 4.7
Identities = 19/72 (26%), Positives = 28/72 (38%)
Frame = -2
Query: 217 SKTSVRKEIIEGTARSQRFENTHXXXXXXXXXXXXXXLKSMRHINISDTRTNIQHTTNAY 38
SK +++ E+I GT+ S R H S ++ ++ TNI Y
Sbjct: 755 SKANLKNEVIPGTSNSSRLSEFHEAKAAKSSTFLPTTCSSEMPLSSANVTTNIPVIPGGY 814
Query: 37 RYTLLRRLSTSN 2
TLL SN
Sbjct: 815 LQTLLDASDLSN 826
>AL139395-1|CAI39510.1| 1516|Homo sapiens novel protein protein.
Length = 1516
Score = 31.1 bits (67), Expect = 4.7
Identities = 19/72 (26%), Positives = 28/72 (38%)
Frame = -2
Query: 217 SKTSVRKEIIEGTARSQRFENTHXXXXXXXXXXXXXXLKSMRHINISDTRTNIQHTTNAY 38
SK +++ E+I GT+ S R H S ++ ++ TNI Y
Sbjct: 755 SKANLKNEVIPGTSNSSRLSEFHEAKAAKSSTFLPTTCSSEMPLSSANVTTNIPVIPGGY 814
Query: 37 RYTLLRRLSTSN 2
TLL SN
Sbjct: 815 LQTLLDASDLSN 826
>AB095942-1|BAC23118.1| 1520|Homo sapiens KIAA2022 protein protein.
Length = 1520
Score = 31.1 bits (67), Expect = 4.7
Identities = 19/72 (26%), Positives = 28/72 (38%)
Frame = -2
Query: 217 SKTSVRKEIIEGTARSQRFENTHXXXXXXXXXXXXXXLKSMRHINISDTRTNIQHTTNAY 38
SK +++ E+I GT+ S R H S ++ ++ TNI Y
Sbjct: 759 SKANLKNEVIPGTSNSSRLSEFHEAKAAKSSTFLPTTCSSEMPLSSANVTTNIPVIPGGY 818
Query: 37 RYTLLRRLSTSN 2
TLL SN
Sbjct: 819 LQTLLDASDLSN 830
>BC141815-1|AAI41816.1| 647|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1 protein.
Length = 647
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 411 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 310
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>BC070176-1|AAH70176.1| 152|Homo sapiens WHSC1 protein protein.
Length = 152
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 411 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 310
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 101 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 135
>AL132868-5|CAM15222.1| 647|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1 protein.
Length = 647
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 411 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 310
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>AF178206-1|AAF23369.1| 647|Homo sapiens MMSET type I protein.
Length = 647
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 411 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 310
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>AF083390-1|AAD19345.1| 647|Homo sapiens putative WHSC1 protein
protein.
Length = 647
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 411 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 310
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>AF083389-1|AAD19344.1| 647|Homo sapiens putative WHSC1 protein
protein.
Length = 647
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 411 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 310
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
>AF071594-1|AAC24151.1| 647|Homo sapiens MMSET type I protein.
Length = 647
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 411 PLKARN-TSDASDSAVGYSDATTTLTSLPEIRNLW 310
PLK RN S A+ SA+G+S +++ SL E LW
Sbjct: 596 PLKKRNRASTAASSALGFSKSSSPSASLTENELLW 630
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,449,580
Number of Sequences: 237096
Number of extensions: 1766442
Number of successful extensions: 3149
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3149
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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