Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1904
         (787 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RR99 Cluster: Putative uncharacterized protein PY0083...    37   0.50 
UniRef50_O96028 Cluster: Probable histone-lysine N-methyltransfe...    35   2.7  
UniRef50_Q4REQ8 Cluster: Chromosome 13 SCAF15122, whole genome s...    34   4.6  
UniRef50_Q7YN59 Cluster: RNA polymerase C2; n=1; Eimeria tenella...    33   8.1  
UniRef50_Q7RMC0 Cluster: Putative uncharacterized protein PY0226...    33   8.1  

>UniRef50_Q7RR99 Cluster: Putative uncharacterized protein PY00833;
            n=1; Plasmodium yoelii yoelii|Rep: Putative
            uncharacterized protein PY00833 - Plasmodium yoelii
            yoelii
          Length = 1132

 Score = 37.1 bits (82), Expect = 0.50
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
 Frame = +3

Query: 282  INTLFTVMYFSGFIFILVNIFNTYNY-VELFCSFFHIVDSYTSLC----WYIFANRQNII 446
            +NTL+       F+F LV I+N YNY + L+  F+   + Y   C    +Y+F N+ N I
Sbjct: 944  VNTLYLTPQ-DNFLFNLVFIYNVYNYLIYLYACFYFTENKYHDFCSNQKFYVFINKINEI 1002


>UniRef50_O96028 Cluster: Probable histone-lysine
           N-methyltransferase NSD2; n=44; Eumetazoa|Rep: Probable
           histone-lysine N-methyltransferase NSD2 - Homo sapiens
           (Human)
          Length = 1365

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 480 EGRYTAA--GAGLK*CFACWQKYTSTKTCSYQQCGK 379
           EGR+T +   +G+  CF C +  T  K C   QCGK
Sbjct: 702 EGRFTCSECASGIHSCFVCKESKTDVKRCVVTQCGK 737


>UniRef50_Q4REQ8 Cluster: Chromosome 13 SCAF15122, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 13 SCAF15122, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 915

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -3

Query: 392 NNVEKRAK*FNIVVCVKNVH*NENKSRKVHNSKQSIDFTNPQNDKTNTLSITLIDN-NNA 216
           N+  K+ K  N++ CV  VH + +     HNS  +++   P N+  +T  +TL+DN NN 
Sbjct: 647 NSSTKQRK--NVISCV-TVHDSPDSDCSSHNSPYTVESRPPNNNGYDT-KMTLLDNCNNG 702

Query: 215 HPYAI 201
           +P  I
Sbjct: 703 NPRTI 707


>UniRef50_Q7YN59 Cluster: RNA polymerase C2; n=1; Eimeria
           tenella|Rep: RNA polymerase C2 - Eimeria tenella
          Length = 1050

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 273 VSEINTLFTVMYFSGFIFILVNIFNTYNYVELFCSFFHIV 392
           + E N L+++  ++      +N+FNT+N +  F +  HI+
Sbjct: 78  IKEFNILYSIQKYNNSYIQFLNLFNTFNKINTFSNALHIM 117


>UniRef50_Q7RMC0 Cluster: Putative uncharacterized protein PY02261;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY02261 - Plasmodium yoelii yoelii
          Length = 730

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 329 NENKSRKVHNSKQSIDFTNPQNDKTNTLSITLIDNNN 219
           N   S  + + K   +  +PQN+K N +++TL DN N
Sbjct: 537 NNESSTNLISKKSETEVESPQNEKINNINVTLTDNVN 573


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,885,815
Number of Sequences: 1657284
Number of extensions: 12548204
Number of successful extensions: 36310
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35805
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)