Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1904
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    31   0.008
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.8  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   3.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   3.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   3.7  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   4.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.4  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 31.5 bits (68), Expect = 0.008
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +3

Query: 252 ISFVILWVSEINTLFTVMYFSGFI-FILVNIFNTY-NYVELFCSFFHIV 392
           ++F+I    EI  ++TV+  SGF  F+   + + + NYV  FCS F +V
Sbjct: 12  MAFIIFVSLEIYHIYTVVEESGFENFVKTYLVSDFENYVTFFCSLFIVV 60


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 318 FIFILVNIFNTYNYVELFCSFFHIVDSYTSLCWYIF 425
           + F    I  T + + L C ++ +V  +  LC Y F
Sbjct: 114 YYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYF 149



 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
 Frame = +3

Query: 291 LFTVMYF-SGFIFILVNIFNTYNYVELFCSFFHIVDSYTSLCWYIFANRQNIIL 449
           L  + YF   FI   V++         FC+F          C +IF N   + L
Sbjct: 143 LLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFL 196


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 279 EINTLFTVMYFSGFIFILVNIFNT 350
           EI+ +  + + S  +FIL+ +FN+
Sbjct: 286 EISYIVLMSFASDLLFILIQLFNS 309


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 279 EINTLFTVMYFSGFIFILVNIFNT 350
           EI+ +  + + S  +FIL+ +FN+
Sbjct: 286 EISYIVLMSFASDLLFILIQLFNS 309


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 279 EINTLFTVMYFSGFIFILVNIFNT 350
           EI+ +  + + S  +FIL+ +FN+
Sbjct: 286 EISYIVLMSFASDLLFILIQLFNS 309


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 45  CRSCALAISDINKISNHKNITIVELFCPCSL 137
           CR C  A SD + ++ H  I   E    C L
Sbjct: 80  CRLCKKAFSDSSTLTKHLRIHSGEKPYECKL 110


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 45  CRSCALAISDINKISNHKNITIVELFCPCSL 137
           CR C  A SD + ++ H  I   E    C L
Sbjct: 336 CRLCKKAFSDSSTLTKHLRIHSGEKPYECKL 366


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 6   FYYSNVFTLDL 38
           FY +N+F+LDL
Sbjct: 310 FYVANIFSLDL 320


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 279 EINTLFTVMYFSGFIFILVNIFNT 350
           EI  +  + + S  +FIL+ +FN+
Sbjct: 284 EIAYIVLLTFASDLLFILIQLFNS 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,114
Number of Sequences: 336
Number of extensions: 3764
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)