Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1904
(787 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132868-4|CAM15221.1| 1365|Homo sapiens Wolf-Hirschhorn syndrom... 35 0.38
AJ007042-1|CAB45386.1| 1365|Homo sapiens TRX5 protein protein. 35 0.38
AF178219-1|AAF23370.1| 1365|Homo sapiens MMSET type II protein. 35 0.38
AF083388-1|AAD21771.1| 1365|Homo sapiens putative WHSC1 protein ... 35 0.38
AF083387-1|AAD21770.1| 1365|Homo sapiens putative WHSC1 protein ... 35 0.38
AF083386-1|AAD19343.1| 1365|Homo sapiens putative WHSC1 protein ... 35 0.38
AF071593-1|AAC24150.1| 1365|Homo sapiens MMSET type II protein. 35 0.38
X83368-1|CAA58284.1| 1101|Homo sapiens idem protein. 31 4.7
BC035683-1|AAH35683.1| 1102|Homo sapiens PIK3CG protein protein. 31 4.7
AY044432-1|AAK95822.1| 568|Homo sapiens TRAF6-binding zinc fing... 31 4.7
AF327656-1|AAG61115.1| 1102|Homo sapiens phosphoinositide-3-kina... 31 4.7
AC005018-1|AAQ96873.1| 1102|Homo sapiens unknown protein. 31 4.7
AB209601-1|BAD92838.1| 502|Homo sapiens TRAF6-inhibitory zinc f... 31 4.7
>AL132868-4|CAM15221.1| 1365|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1 protein.
Length = 1365
Score = 34.7 bits (76), Expect = 0.38
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 480 EGRYTAA--GAGLK*CFACWQKYTSTKTCSYQQCGK 379
EGR+T + +G+ CF C + T K C QCGK
Sbjct: 702 EGRFTCSECASGIHSCFVCKESKTDVKRCVVTQCGK 737
>AJ007042-1|CAB45386.1| 1365|Homo sapiens TRX5 protein protein.
Length = 1365
Score = 34.7 bits (76), Expect = 0.38
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 480 EGRYTAA--GAGLK*CFACWQKYTSTKTCSYQQCGK 379
EGR+T + +G+ CF C + T K C QCGK
Sbjct: 702 EGRFTCSECASGIHSCFVCKESKTDVKRCVVTQCGK 737
>AF178219-1|AAF23370.1| 1365|Homo sapiens MMSET type II protein.
Length = 1365
Score = 34.7 bits (76), Expect = 0.38
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 480 EGRYTAA--GAGLK*CFACWQKYTSTKTCSYQQCGK 379
EGR+T + +G+ CF C + T K C QCGK
Sbjct: 702 EGRFTCSECASGIHSCFVCKESKTDVKRCVVTQCGK 737
>AF083388-1|AAD21771.1| 1365|Homo sapiens putative WHSC1 protein
protein.
Length = 1365
Score = 34.7 bits (76), Expect = 0.38
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 480 EGRYTAA--GAGLK*CFACWQKYTSTKTCSYQQCGK 379
EGR+T + +G+ CF C + T K C QCGK
Sbjct: 702 EGRFTCSECASGIHSCFVCKESKTDVKRCVVTQCGK 737
>AF083387-1|AAD21770.1| 1365|Homo sapiens putative WHSC1 protein
protein.
Length = 1365
Score = 34.7 bits (76), Expect = 0.38
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 480 EGRYTAA--GAGLK*CFACWQKYTSTKTCSYQQCGK 379
EGR+T + +G+ CF C + T K C QCGK
Sbjct: 702 EGRFTCSECASGIHSCFVCKESKTDVKRCVVTQCGK 737
>AF083386-1|AAD19343.1| 1365|Homo sapiens putative WHSC1 protein
protein.
Length = 1365
Score = 34.7 bits (76), Expect = 0.38
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 480 EGRYTAA--GAGLK*CFACWQKYTSTKTCSYQQCGK 379
EGR+T + +G+ CF C + T K C QCGK
Sbjct: 702 EGRFTCSECASGIHSCFVCKESKTDVKRCVVTQCGK 737
>AF071593-1|AAC24150.1| 1365|Homo sapiens MMSET type II protein.
Length = 1365
Score = 34.7 bits (76), Expect = 0.38
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 480 EGRYTAA--GAGLK*CFACWQKYTSTKTCSYQQCGK 379
EGR+T + +G+ CF C + T K C QCGK
Sbjct: 702 EGRFTCSECASGIHSCFVCKESKTDVKRCVVTQCGK 737
>X83368-1|CAA58284.1| 1101|Homo sapiens idem protein.
Length = 1101
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 302 NSKQSIDFTNPQNDKTNTLSITLIDNNNAHPYAIP 198
N+ + TNP DK N++SI+++ +N HP A+P
Sbjct: 497 NADKLTSATNP--DKENSMSISILLDNYCHPIALP 529
>BC035683-1|AAH35683.1| 1102|Homo sapiens PIK3CG protein protein.
Length = 1102
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 302 NSKQSIDFTNPQNDKTNTLSITLIDNNNAHPYAIP 198
N+ + TNP DK N++SI+++ +N HP A+P
Sbjct: 498 NADKLTSATNP--DKENSMSISILLDNYCHPIALP 530
>AY044432-1|AAK95822.1| 568|Homo sapiens TRAF6-binding zinc finger
protein protein.
Length = 568
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 18 NVFTLDLCVCRSCALAISDINKISNHKNITIVELFCPCSLSDK 146
N ++ C C C A++ +K++ HK I E C D+
Sbjct: 193 NYTKVNFCKCEECEKAVNQSSKLTKHKRIYTCEKLYKCQECDR 235
>AF327656-1|AAG61115.1| 1102|Homo sapiens phosphoinositide-3-kinase
gamma catalytic subunit protein.
Length = 1102
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 302 NSKQSIDFTNPQNDKTNTLSITLIDNNNAHPYAIP 198
N+ + TNP DK N++SI+++ +N HP A+P
Sbjct: 498 NADKLTSATNP--DKENSMSISILLDNYCHPIALP 530
>AC005018-1|AAQ96873.1| 1102|Homo sapiens unknown protein.
Length = 1102
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 302 NSKQSIDFTNPQNDKTNTLSITLIDNNNAHPYAIP 198
N+ + TNP DK N++SI+++ +N HP A+P
Sbjct: 498 NADKLTSATNP--DKENSMSISILLDNYCHPIALP 530
>AB209601-1|BAD92838.1| 502|Homo sapiens TRAF6-inhibitory zinc
finger protein variant protein.
Length = 502
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 18 NVFTLDLCVCRSCALAISDINKISNHKNITIVELFCPCSLSDK 146
N ++ C C C A++ +K++ HK I E C D+
Sbjct: 127 NYTKVNFCKCEECEKAVNQSSKLTKHKRIYTCEKLYKCQECDR 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,459,199
Number of Sequences: 237096
Number of extensions: 1869769
Number of successful extensions: 3226
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3226
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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