Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1904
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003638-1|AAO39642.1|  511|Drosophila melanogaster AT17761p pro...    31   1.3  
AE014296-1814|AAN11912.1|  511|Drosophila melanogaster CG12362-P...    31   1.3  
AE014296-1813|AAF50159.1|  511|Drosophila melanogaster CG12362-P...    31   1.3  
AY089513-1|AAL90251.1|  816|Drosophila melanogaster GH22266p pro...    29   7.2  
AE014296-152|AAF47427.1|  816|Drosophila melanogaster CG13907-PA...    29   7.2  

>BT003638-1|AAO39642.1|  511|Drosophila melanogaster AT17761p
           protein.
          Length = 511

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 459 GAGLK*CFACWQKYTSTKTCS 397
           G G   C ACW++Y + KTCS
Sbjct: 154 GCGHNFCAACWKQYLANKTCS 174


>AE014296-1814|AAN11912.1|  511|Drosophila melanogaster CG12362-PB,
           isoform B protein.
          Length = 511

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 459 GAGLK*CFACWQKYTSTKTCS 397
           G G   C ACW++Y + KTCS
Sbjct: 154 GCGHNFCAACWKQYLANKTCS 174


>AE014296-1813|AAF50159.1|  511|Drosophila melanogaster CG12362-PA,
           isoform A protein.
          Length = 511

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 459 GAGLK*CFACWQKYTSTKTCS 397
           G G   C ACW++Y + KTCS
Sbjct: 154 GCGHNFCAACWKQYLANKTCS 174


>AY089513-1|AAL90251.1|  816|Drosophila melanogaster GH22266p
           protein.
          Length = 816

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +3

Query: 276 SEINTLFTVMYFSGFIFILVNIFNTYNYVELFCSFFHIVDS 398
           S +NT+  V      +F+L+ + N +    L+  F ++VD+
Sbjct: 556 SVVNTMLDVSLLKDPVFMLIGVSNIFGMAGLYVPFVYLVDA 596


>AE014296-152|AAF47427.1|  816|Drosophila melanogaster CG13907-PA
           protein.
          Length = 816

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +3

Query: 276 SEINTLFTVMYFSGFIFILVNIFNTYNYVELFCSFFHIVDS 398
           S +NT+  V      +F+L+ + N +    L+  F ++VD+
Sbjct: 556 SVVNTMLDVSLLKDPVFMLIGVSNIFGMAGLYVPFVYLVDA 596


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,562,829
Number of Sequences: 53049
Number of extensions: 598666
Number of successful extensions: 1283
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)