Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1901
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017708-1|AAH17708.1|  375|Homo sapiens ubiquitin-conjugating e...    34   0.39 

>BC017708-1|AAH17708.1|  375|Homo sapiens ubiquitin-conjugating
           enzyme E2Q (putative) 2 protein.
          Length = 375

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +2

Query: 131 RQQTRWLLRKKCKTYN-TKRIVFHYLYSSLPVPQAGTDECI---EEESWRNLAASFDNL 295
           RQQ +WL+ + C  YN  K +    L   LP  Q GT E +   EEE    +A   ++L
Sbjct: 96  RQQLKWLICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDL 154


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,353,439
Number of Sequences: 237096
Number of extensions: 1521472
Number of successful extensions: 2418
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2418
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)