Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1899
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    59   1e-10

>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 59.3 bits (137), Expect = 1e-10
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +2

Query: 74  AQRARRSNAGNRMAKLLDEEEEDDFYKTTYGGFN 175
           A R RRSNAG RMA LL+EEEED+FYKT+YGGF+
Sbjct: 3   ATRERRSNAGRRMATLLNEEEEDEFYKTSYGGFS 36



 Score = 34.7 bits (76), Expect = 0.003
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 570 MPTQXXXXXXXXXXXXXXXKSLERFEQIELEXXXXXXXXXXXXGPVLKYHSFAVPV 737
           +PTQ               KSLERF ++ELE            GP ++Y S A+P+
Sbjct: 168 IPTQEELLEEAEITERENIKSLERFRRMELEKQKIRPTNKKFTGPTIRYFSTAMPI 223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,741
Number of Sequences: 2352
Number of extensions: 6425
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)