Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1892
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 114 8e-26
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 105 3e-23
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 81 1e-15
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 74 1e-13
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 74 1e-13
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 74 1e-13
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 74 1e-13
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 72 5e-13
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 71 1e-12
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 71 1e-12
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 67 2e-11
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 58 5e-09
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 57 2e-08
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 54 2e-07
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 50 1e-06
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 50 2e-06
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 50 2e-06
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 48 1e-05
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 48 1e-05
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 45 5e-05
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 44 1e-04
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 44 1e-04
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 44 1e-04
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 44 1e-04
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 44 1e-04
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 42 4e-04
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 42 7e-04
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 42 7e-04
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 41 9e-04
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 41 0.001
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 41 0.001
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 40 0.002
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 40 0.002
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 40 0.002
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 40 0.002
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 40 0.003
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 39 0.004
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 39 0.004
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 39 0.004
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 39 0.004
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 39 0.004
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 39 0.005
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 39 0.005
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.006
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 38 0.006
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 37 0.014
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 37 0.019
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 37 0.019
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 37 0.019
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 37 0.019
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 36 0.025
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 36 0.044
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 35 0.058
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 34 0.10
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 34 0.10
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 34 0.10
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 33 0.31
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 33 0.31
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 33 0.31
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 32 0.41
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 32 0.54
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.71
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 30 1.7
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 30 2.2
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 30 2.2
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 30 2.2
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 29 2.9
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 29 2.9
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 29 2.9
Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical p... 29 5.0
Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical pr... 29 5.0
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 29 5.0
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 28 6.7
U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 28 8.8
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 114 bits (274), Expect = 8e-26
Identities = 56/76 (73%), Positives = 58/76 (76%)
Frame = +3
Query: 282 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAG 461
MREF ALTVQFVS F+EKYDPTIEDFYRKEIEVD P VLEILDTAG
Sbjct: 1 MREFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQPSVLEILDTAG 60
Query: 462 TEQFASMRDLYIKNGQ 509
TEQF+SMRDLYIKNGQ
Sbjct: 61 TEQFSSMRDLYIKNGQ 76
Score = 102 bits (245), Expect = 3e-22
Identities = 49/74 (66%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = +2
Query: 485 RSVY-KKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVA 661
R +Y K GFVVVYS+T+ QTF DI+ MKE I RVKGSE VPILLVGNK DL HQR+V
Sbjct: 68 RDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCDLSHQRQVR 127
Query: 662 HAEGAALAQMWGCP 703
EG ALA+ W CP
Sbjct: 128 SEEGLALAESWSCP 141
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 703 FVEASAKSRTNVNEMFAEIVVK*TLVQKK 789
F E SAK+ NVN FAEIV + VQ K
Sbjct: 142 FTECSAKNNQNVNVTFAEIVREMNYVQNK 170
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 105 bits (253), Expect = 3e-23
Identities = 49/76 (64%), Positives = 56/76 (73%)
Frame = +3
Query: 282 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAG 461
MRE+ ALTVQFV G F+EKYDPTIED YRK++EVD C+LEILDTAG
Sbjct: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 60
Query: 462 TEQFASMRDLYIKNGQ 509
TEQF +MRDLY+KNGQ
Sbjct: 61 TEQFTAMRDLYMKNGQ 76
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +2
Query: 485 RSVY-KKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVA 661
R +Y K GFV+VYS+T TF D+ +++ I RVK ++ VP++LVGNK DLE +R V
Sbjct: 68 RDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDLEDERVVG 127
Query: 662 HAEGAALAQMWG 697
+G LA+ +G
Sbjct: 128 KDQGQNLARQFG 139
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +1
Query: 694 GLSFVEASAKSRTNVNEMFAEIV 762
G +F+E SAK++ NV+E+F ++V
Sbjct: 139 GSAFLETSAKAKINVSEVFYDLV 161
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/77 (42%), Positives = 51/77 (66%)
Frame = +3
Query: 279 IMREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTA 458
+M E+ ALT+Q + F+E+YDPTIED YRK++ +D C+L+ILDTA
Sbjct: 3 VMTEYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTA 62
Query: 459 GTEQFASMRDLYIKNGQ 509
G E++++MRD Y++ G+
Sbjct: 63 GQEEYSAMRDQYMRTGE 79
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/66 (36%), Positives = 42/66 (63%)
Frame = +2
Query: 509 GFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALAQ 688
GF++V+++ ++F+++ +E I RVK S+ VP++LVGNK DL R V + A+
Sbjct: 80 GFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLS-SRSVDFRTVSETAK 138
Query: 689 MWGCPS 706
+G P+
Sbjct: 139 GYGIPN 144
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 79.8 bits (188), Expect = 2e-15
Identities = 31/59 (52%), Positives = 47/59 (79%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 509
ALT+Q + F+E+YDPTIED YRK++ +D C+L+ILDTAG E++++MRD Y++ G+
Sbjct: 18 ALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGE 76
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/66 (36%), Positives = 42/66 (63%)
Frame = +2
Query: 509 GFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALAQ 688
GF++V+++ ++F+++ +E I RVK S+ VP++LVGNK DL R V + A+
Sbjct: 77 GFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLS-SRSVDFRTVSETAK 135
Query: 689 MWGCPS 706
+G P+
Sbjct: 136 GYGIPN 141
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 506
ALT+QF+ F++ YDPTIED Y K+ VD C LEILDTAG E+F++MR+ Y++ G
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTG 89
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Frame = +2
Query: 506 SGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALA 685
SGF++V+++T+ +F+++K + ELI R+K + PI+LVGNKADLE++R VA E LA
Sbjct: 90 SGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELA 149
Query: 686 QMWGCP----SSKLQQRV 727
P S+K+++ V
Sbjct: 150 HRLSIPYLECSAKIRKNV 167
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 506
ALT+QF+ F++ YDPTIED Y K+ VD C LEILDTAG E+F++MR+ Y++ G
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTG 89
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Frame = +2
Query: 506 SGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALA 685
SGF++V+++T+ +F+++K + ELI R+K + PI+LVGNKADLE++R VA E LA
Sbjct: 90 SGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELA 149
Query: 686 QMWGCP----SSKLQQRV 727
P S+K+++ V
Sbjct: 150 HRLSIPYLECSAKIRKNV 167
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 506
ALT+QF+ F++ YDPTIED Y K+ VD C LEILDTAG E+F++MR+ Y++ G
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTG 89
Score = 62.9 bits (146), Expect = 3e-10
Identities = 25/52 (48%), Positives = 42/52 (80%)
Frame = +2
Query: 506 SGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVA 661
SGF++V+++T+ +F+++K + ELI R+K + PI+LVGNKADLE++R V+
Sbjct: 90 SGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVS 141
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 506
ALT+QF+ F++ YDPTIED Y K+ VD C LEILDTAG E+F++MR+ Y++ G
Sbjct: 32 ALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTG 89
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Frame = +2
Query: 506 SGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALA 685
SGF++V+++T+ +F+++K + ELI R+K + PI+LVGNKADLE++R VA E LA
Sbjct: 90 SGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELA 149
Query: 686 QMWGCP----SSKLQQRV 727
P S+K+++ V
Sbjct: 150 HRLSIPYLECSAKIRKNV 167
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 71.7 bits (168), Expect = 5e-13
Identities = 36/76 (47%), Positives = 44/76 (57%)
Frame = +3
Query: 282 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAG 461
M+E+ ALT+Q+V G F+ YD TIED YRK +VD LEILDTAG
Sbjct: 1 MKEYKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDTAG 60
Query: 462 TEQFASMRDLYIKNGQ 509
TEQF MR+ Y + Q
Sbjct: 61 TEQFTGMRETYYRTAQ 76
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ GFV+V+SL TF+++K I ++G E VP++LVGNK+DL R+V +E
Sbjct: 72 YRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKE-VPMILVGNKSDLAETRQVDESEA 130
Query: 674 AALAQMWGCP----SSKLQQRVAPT*TRC 748
A+ P S++L Q V+ C
Sbjct: 131 HNFAEKLKIPYFETSARLNQNVSEVFEEC 159
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 70.9 bits (166), Expect = 1e-12
Identities = 35/96 (36%), Positives = 59/96 (61%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQA 512
+LT+QF F++ YDPTIED Y + E+D + ++++LDTAG E+F++MR+ YI+ G+
Sbjct: 32 SLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEEFSAMREQYIRGGRG 91
Query: 513 L**YIH*QTTKRFKTSNQ*RN*LLVSKDQNVYQFYL 620
K F+ +++ N +L KD++ Y L
Sbjct: 92 FLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLL 127
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +2
Query: 509 GFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALA 685
GF++V+S+T ++F++ + + RVK P+LLV NK DL +QR V+ EG LA
Sbjct: 91 GFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLLVANKVDLINQRVVSEQEGRELA 149
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 70.9 bits (166), Expect = 1e-12
Identities = 35/96 (36%), Positives = 59/96 (61%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQA 512
+LT+QF F++ YDPTIED Y + E+D + ++++LDTAG E+F++MR+ YI+ G+
Sbjct: 32 SLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEEFSAMREQYIRGGRG 91
Query: 513 L**YIH*QTTKRFKTSNQ*RN*LLVSKDQNVYQFYL 620
K F+ +++ N +L KD++ Y L
Sbjct: 92 FLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLL 127
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +2
Query: 509 GFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALA 685
GF++V+S+T ++F++ + + RVK P+LLV NK DL +QR V+ EG LA
Sbjct: 91 GFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLLVANKVDLINQRVVSEQEGRELA 149
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/90 (35%), Positives = 56/90 (62%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQA 512
ALT+QF+ F+E+Y+PT D YRK++ +D C ++ILDTAG E ++++RD Y ++G+
Sbjct: 32 ALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSIDILDTAGQEDYSAIRDNYYRSGEG 91
Query: 513 L**YIH*QTTKRFKTSNQ*RN*LLVSKDQN 602
+ F+ +N+ R +L K+ +
Sbjct: 92 FICVFSILDMESFEATNEFREQILRVKNSD 121
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSER-VPILLVGNKADLEHQREVAHAE 670
Y+ GF+ V+S+ + ++F+ +E I RVK S+ VPI+LVGNK D+ QR V+
Sbjct: 86 YRSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGDMRDQRVVSAEL 145
Query: 671 GAALAQMWGC 700
A+ WGC
Sbjct: 146 CRQRAEQWGC 155
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +2
Query: 500 KWSGFVVVYSLTNHQTFQDIKPMKELITRVKGS--ERVPILLVGNKADLEHQREVAHAEG 673
K + F+++YS+TN Q+F ++ P+ E++ VKG+ PI+LVGNK D E +REV+ G
Sbjct: 8 KGNAFILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSG 67
Query: 674 AALAQMWGC 700
+A C
Sbjct: 68 QKVATNMEC 76
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +2
Query: 506 SGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALA 685
+GF++VY++ + ++F+ + E I R G +PI++VGNK DL QR V EG LA
Sbjct: 86 NGFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELA 145
Query: 686 QMW 694
+ W
Sbjct: 146 RQW 148
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQF 473
AL ++F F E+Y+ TIED + K I + L + DTAG +++
Sbjct: 28 ALVLRFTQNIFPERYESTIEDQHSKHIAAFHRDYHLRVTDTAGQQEY 74
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +2
Query: 515 VVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALA 685
++VY +T+ TF+D++ + + R G+E + L+GNK DL +REV AEG A+A
Sbjct: 133 LIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVEKREVTEAEGKAMA 189
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 438 LEILDTAGTEQFASMRDLYIKNGQA 512
L++ DTAG E+F M +Y++N A
Sbjct: 107 LQVWDTAGQERFRCMVPMYMRNADA 131
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +2
Query: 485 RSVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAH 664
RS Y+ +G ++VY +T TF + E + S V I+L+GNK+DLE +REV
Sbjct: 73 RSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMV-IMLIGNKSDLEARREVKR 131
Query: 665 AEGAALAQMWG 697
EG A A+ G
Sbjct: 132 EEGEAFAREHG 142
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +2
Query: 509 GFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALAQ 688
GF++++ +TN Q+F +I+ + E+ I++ GNKADLE++R+V+ A LA
Sbjct: 91 GFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLAD 150
Query: 689 MWGCP 703
G P
Sbjct: 151 QLGLP 155
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +2
Query: 509 GFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALAQ 688
GF++++ +TN Q+F +I+ + E+ I++ GNKADLE++R+V+ A LA
Sbjct: 91 GFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLAD 150
Query: 689 MWGCP 703
G P
Sbjct: 151 QLGLP 155
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 48.0 bits (109), Expect = 8e-06
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +2
Query: 488 SVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHA 667
S Y+ G ++VY +T+ ++F ++ + R+ G + I+L+GNK+DLE REV
Sbjct: 74 SYYRHAIGALLVYDITSRESFYHLEHWLTDLQRL-GDPDIVIVLIGNKSDLEADREVRKE 132
Query: 668 EGAALAQMWG 697
EG A A+ +G
Sbjct: 133 EGEAFAREFG 142
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 503
L ++F+ F + T+ +F + +E+D L + DT G E+F S+ Y ++
Sbjct: 22 LLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSYYRH 78
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ G ++VY +TN ++F++IK I S+ V +++GNK D+E +REV+ G
Sbjct: 78 YRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD-VERMIIGNKCDIEERREVSRDRG 136
Query: 674 AALAQMWG 697
LA +G
Sbjct: 137 EQLAIEYG 144
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 345 QFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQAL 515
+F F + TI DF + IE+D L+I DTAG E+F ++ Y + +
Sbjct: 27 RFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGI 84
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ G ++VY +TN ++F++IK I S+ V +++GNK D+E +REV+ G
Sbjct: 78 YRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD-VERMIIGNKCDIEERREVSRDRG 136
Query: 674 AALAQMWG 697
LA +G
Sbjct: 137 EQLAIEYG 144
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 345 QFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQAL 515
+F F + TI DF + IE+D L+I DTAG E+F ++ Y + +
Sbjct: 27 RFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGI 84
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = +2
Query: 488 SVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHA 667
S Y+ G +VVY +T+ +TF ++K + I R E V LLVGNK DL +R V
Sbjct: 79 SYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRY-ACENVNKLLVGNKCDLTAKRAVETQ 137
Query: 668 EGAALAQMWGCP 703
A G P
Sbjct: 138 AAQDYAGQLGIP 149
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQA 512
L ++F + E Y TI DF + IE+D L+I DTAG E+F ++ Y +
Sbjct: 27 LLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHG 86
Query: 513 L 515
+
Sbjct: 87 I 87
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVL-EILDTAGTEQFASMRDLYIKNGQ 509
A+ QF+ F+E Y PT+E+F E E++ ++ +I+D++G+ F M++LYI
Sbjct: 37 AMVSQFLWHKFVEDYRPTVEEFNWIEYEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGTAD 96
Query: 510 A 512
A
Sbjct: 97 A 97
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ GF+++Y +TN ++F ++ I + E ++LVGNK D++ +R V+ G
Sbjct: 92 YRGAMGFILMYDITNEESFNSVQDWCTQI-KTYSWENAQVVLVGNKCDMDSERVVSMDRG 150
Query: 674 AALAQMWG 697
LA G
Sbjct: 151 RQLADQLG 158
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ GF+++Y +TN ++F ++ I + E ++LVGNK D++ +R V+ G
Sbjct: 92 YRGAMGFILMYDITNEESFNSVQDWCTQI-KTYSWENAQVVLVGNKCDMDSERVVSMDRG 150
Query: 674 AALAQMWG 697
LA G
Sbjct: 151 RQLADQLG 158
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ GF+++Y +TN ++F ++ I + E ++LVGNK D++ +R V+ G
Sbjct: 92 YRGAMGFILMYDITNEESFNSVQDWCTQI-KTYSWENAQVVLVGNKCDMDSERVVSMDRG 150
Query: 674 AALAQMWG 697
LA G
Sbjct: 151 RQLADQLG 158
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ GF+++Y +TN ++F ++ I + E ++LVGNK D++ +R V+ G
Sbjct: 106 YRGAMGFILMYDITNEESFNSVQDWCTQI-KTYSWENAQVVLVGNKCDMDSERVVSMDRG 164
Query: 674 AALAQMWG 697
LA G
Sbjct: 165 RQLADQLG 172
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ GF+++Y +TN ++F ++ I + E ++LVGNK D++ +R V+ G
Sbjct: 92 YRGAMGFILMYDITNEESFNSVQDWCTQI-KTYSWENAQVVLVGNKCDMDSERVVSMDRG 150
Query: 674 AALAQMWG 697
LA G
Sbjct: 151 RQLADQLG 158
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +2
Query: 485 RSVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAH 664
RS Y+ +G ++VY +T T+ + + + I L+GNKADLE QR+V +
Sbjct: 78 RSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLT-NPNTAIFLIGNKADLEDQRDVPY 136
Query: 665 AEGAALAQ 688
E A A+
Sbjct: 137 EEAKAFAE 144
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 345 QFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIK 500
QF FM TI +F + IEV L+I DTAG E+F ++ Y +
Sbjct: 30 QFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYR 82
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ +VVY +TN ++FQ K + + R + S + + L GNKAD+ ++R V + E
Sbjct: 89 YRGAQAAIVVYDITNQESFQKAKNWVKELQR-QASPNIVMALAGNKADVANKRTVEYEEA 147
Query: 674 AALAQ 688
A A+
Sbjct: 148 NAYAE 152
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 688 DVGLSFVEASAKSRTNVNEMFAEIVVK 768
D L F+E SAK+ NVN++F I K
Sbjct: 153 DNALLFMETSAKTSMNVNDIFMAIAKK 179
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ +G ++V+ +T+ ++F+ +K I G+ IL+VGNK DLE +R+V +
Sbjct: 82 YRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNT-AEILIVGNKIDLEEERQVTRQDA 140
Query: 674 AALAQMWG 697
A A+ G
Sbjct: 141 EAYAESEG 148
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKP-MKELITRVKGSERVPILLVGNKADLEHQREVAHAE 670
Y+ G ++VY + H T+++++ +KEL R + + I+LVGNK+DL H R V E
Sbjct: 81 YRGAVGALLVYDIAKHVTYENVERWLKEL--RDHADQNIVIMLVGNKSDLRHLRAVPTDE 138
Query: 671 GAALAQ 688
A+
Sbjct: 139 AKIYAE 144
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +2
Query: 512 FVVVYSLTNHQTFQDIKPMKELITR---VKGSERVPILLVGNKADLEHQREVAHAEGAAL 682
+VVVY +T+ +FQ + + E I+R V LLVGNK DLE R+V+ EG L
Sbjct: 82 YVVVYDVTSQLSFQYAEGILERISRHEHVLCPREHRTLLVGNKTDLERYRQVSETEGERL 141
Query: 683 A 685
A
Sbjct: 142 A 142
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMR 485
A+ V++++ F+ +YD T+ED Y ++ V ++ ++DT MR
Sbjct: 24 AIAVKYITKRFIGEYDSTLEDNYCRQETVGGQSLMVWMMDTVENATKDEMR 74
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/55 (34%), Positives = 35/55 (63%)
Frame = +2
Query: 482 ARSVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEH 646
A S Y+ G ++VY ++ H+T++ ++ +++ R +E + I LVGNK+DL H
Sbjct: 74 ASSYYRGALGALLVYDISKHKTYESVEQWLKVL-RDHANEDIVITLVGNKSDLSH 127
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQF 473
L +F F K PTI +F K I V+ ++I DTAG E+F
Sbjct: 24 LLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERF 70
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2
Query: 515 VVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALAQ 688
VVVY +TN +F + + +GS+ V I+LVGNK DL +R+V EG A+
Sbjct: 87 VVVYDITNSNSFHQTSKWIDDVRTERGSD-VIIMLVGNKTDLSDKRQVTTDEGERKAK 143
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 503
+L +F+ F Y TI DF K + +++ L++ DTAG E+F S+ YI++
Sbjct: 25 SLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRD 82
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/71 (32%), Positives = 40/71 (56%)
Frame = +2
Query: 485 RSVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAH 664
R+ Y+ G ++VY +T ++F ++ + R G + I+L+GNK+DL+ R+V
Sbjct: 73 RAYYRNALGALLVYDITCRKSFVHLEQWLSDL-RQHGHPEMVIMLIGNKSDLKAVRDVTT 131
Query: 665 AEGAALAQMWG 697
EG A A+ G
Sbjct: 132 EEGEAFAKKNG 142
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 41.1 bits (92), Expect = 9e-04
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Frame = +2
Query: 440 RNFGHRWHGAVCFDAR--SVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPI 613
+N G + C DAR VYK +G + V+ +T T++ ++ KE+ VK ++P+
Sbjct: 124 KNDGLDYEDTAC-DARFVDVYKGTNGVIFVFDITKTWTWEYVQ--KEI---VKVPNKIPV 177
Query: 614 LLVGNKADLEHQREVAHAEGAALAQMWG----CPSSKLQQRVAP 733
L++ N+ D+ H R+V + + +++ P + R AP
Sbjct: 178 LVLANRRDMGHHRQVTDLQCSTFVELFNSSHPSPDGSPRARFAP 221
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +2
Query: 488 SVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHA 667
S Y+ G ++VY +TN ++F +I I SE V +++GNK D+ +R V+
Sbjct: 77 SYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDE-HASEDVVKMILGNKCDMSDRRVVSRE 135
Query: 668 EGAALAQMWG 697
G +AQ G
Sbjct: 136 RGEKIAQDHG 145
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 345 QFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQAL 515
+F F + TI DF K IE+ L+I DTAG E+F ++ Y + +
Sbjct: 28 RFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGI 85
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 512 FVVVYSLTNHQTFQDIKPMKELITRVKGSERVP--ILLVGNKADLEHQREVAHAEGAALA 685
++V+Y++ N Q+F + E IT + VP + L+GNK DL+ + ++ EG ++A
Sbjct: 247 YIVMYNMDNRQSFIYATQILERITLANLNNPVPLQLFLIGNKCDLKRNQVISTNEGKSVA 306
Query: 686 QMWGC 700
+ + C
Sbjct: 307 RTFKC 311
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 485 RSVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSER-VPILLVGNKADLEHQR--E 655
+S +++ G ++VY + Q+F ++ E I + +ER +PI+LVGNK D+
Sbjct: 528 KSYFRRADGAILVYDVCAEQSFLRVRDWIETIK--ESTERSIPIILVGNKVDMRISTPGS 585
Query: 656 VAHAEGAALAQMWG 697
VA +GA++A G
Sbjct: 586 VAKTDGASMAAAMG 599
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 393 DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIK 500
DF+ K + VD L++ DTAG E+F S+ Y +
Sbjct: 497 DFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFR 532
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 512 FVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAE-GAALAQ 688
F+VVYS+ + +++ E+I G+ +P L+ GNK DLE +R V E AA A
Sbjct: 308 FLVVYSIDSKSSWKQAMVALEMIRDRPGTRNLPTLVAGNKIDLERKRTVTKQEVRAAKAA 367
Query: 689 M 691
M
Sbjct: 368 M 368
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +2
Query: 485 RSVYKKWSGFVVVYSLTNHQTFQDIKP-MKELITRVKGSE--RVPILLVGNKADLEHQRE 655
+S Y+ G + +Y TN ++F+ ++ +KE + G + LVG K+D++ QR+
Sbjct: 85 KSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQRQ 144
Query: 656 VAHAEGAALAQ 688
V + EG A+
Sbjct: 145 VNYEEGEYFAK 155
Score = 35.9 bits (79), Expect = 0.033
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 348 FVSGCFMEKYDPTIE-DFYRKEIEVDNSPCV-LEILDTAGTEQFASMRDLYIKN 503
F G E DPT+ DFY + IE+ V L++ DTAG E+F S+ Y +N
Sbjct: 37 FTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQEKFRSITKSYYRN 90
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 488 SVYKKWSGFVVVYSLTNHQTFQDIKP--MKELITRVKGSERVPILLVGNKADLEHQREVA 661
S Y G + VY +TN ++F++++ +KE+ + ++LVGNKAD++ +R+V
Sbjct: 74 SYYHSAHGVMCVYDMTNEKSFENLEKYWLKEI--KQHAPPNAVLMLVGNKADMDQERKVD 131
Query: 662 HAEGAALAQMWG 697
LA G
Sbjct: 132 FDRAEKLASRLG 143
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 512 FVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALAQM 691
+ +VY++ N ++F + + K + I+L+GNK DL+ V+ EGA LA++
Sbjct: 247 YAIVYNVDNRESFVCATDLLSRLLNRKIARGANIILIGNKIDLKRNTVVSKMEGACLAKV 306
Query: 692 WGC 700
C
Sbjct: 307 HKC 309
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 506 SGFVVVYSLTNHQTFQDIKPMKELITRVKGSER--VPILLVGNKADLEHQREVAHAEGAA 679
+G +++YS+ + Q+F E+ R++ S PI+LVG+K D+ +R V EG
Sbjct: 290 NGIIIMYSVVDRQSFYHAA---EIFKRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQ 346
Query: 680 LAQMWGCP 703
LA+ G P
Sbjct: 347 LARTLGIP 354
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
L + + + F +Y PT+ D Y + VD P L + DTAG E + +R L
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPL 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQRE 655
Y + F+V ++L N +F++++ K PI+LVG KADL R+
Sbjct: 72 YPQTDVFLVCFALNNPASFENVRA-KWYPEVSHHCPNTPIILVGTKADLREDRD 124
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
L + + + F +Y PT+ D Y + VD P L + DTAG E + +R L
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPL 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQRE 655
Y + F+V ++L N +F++++ K PI+LVG KADL R+
Sbjct: 72 YPQTDVFLVCFALNNPASFENVRA-KWYPEVSHHCPNTPIILVGTKADLREDRD 124
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
L + + + F +Y PT+ D Y + VD P L + DTAG E + +R L
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPL 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQRE 655
Y + F+V ++L N +F++++ K PI+LVG KADL R+
Sbjct: 72 YPQTDVFLVCFALNNPASFENVRA-KWYPEVSHHCPNTPIILVGTKADLREDRD 124
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
L + + + F +Y PT+ D Y + VD P L + DTAG E + +R L
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPL 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQRE 655
Y + F+V ++L N +F++++ K PI+LVG KADL R+
Sbjct: 72 YPQTDVFLVCFALNNPASFENVRA-KWYPEVSHHCPNTPIILVGTKADLREDRD 124
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
L + + + F +Y PT+ D Y + VD P L + DTAG E + +R L
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPL 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQRE 655
Y + F+V ++L N +F++++ K PI+LVG KADL R+
Sbjct: 72 YPQTDVFLVCFALNNPASFENVRA-KWYPEVSHHCPNTPIILVGTKADLREDRD 124
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCVLEILDTAGTEQFASM 482
+L Q+V+ F +Y TI DF +++ +D+ L+I DTAG E+F S+
Sbjct: 24 SLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQSL 74
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 515 VVVYSLTNHQTFQDIKPMKE---LITRVKGSERVPILLVGNKADLEHQREVAHAEGAALA 685
V+ + +TN +F+ + ++ + + + P +L+GNK DLE QR V+ +
Sbjct: 86 VLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDLESQRAVSSKRAQSWC 145
Query: 686 QMWG 697
Q G
Sbjct: 146 QTKG 149
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRD 488
L + + + F +Y PT+ D Y + VD P L + DTAG E + +R+
Sbjct: 19 LLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRE 69
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 515 VVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEGAALAQ 688
VVVY +TN +F + + +G + V I+LVGNK DL +R+V+ +G A+
Sbjct: 88 VVVYDITNANSFHQTTKWVDDVRNERGCD-VIIVLVGNKTDLADKRQVSTEDGEKKAR 144
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 264 DLRSTIMREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVL 440
D + +++F ++ +F+ F Y TI DF K + +++ L
Sbjct: 3 DFTNNALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRL 62
Query: 441 EILDTAGTEQFASMRDLYIKN 503
++ DTAG E+F S+ YI++
Sbjct: 63 QLWDTAGQERFRSLIPSYIRD 83
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQA 512
L +F G F TI DF K ++V N L+I DTAG E+F S+ Y ++ A
Sbjct: 23 LVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQSYYRSAHA 82
Query: 513 L 515
+
Sbjct: 83 I 83
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 485 RSVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKG--SERVPILLVGNKADLEHQREV 658
+S Y+ V+VY ++ +F D P E + ++ + RV +LVGNK D +REV
Sbjct: 74 QSYYRSAHAIVLVYDVSCQPSF-DCLP--EWLGEIESYANRRVLKILVGNKVDKGDEREV 130
Query: 659 AHAEG 673
G
Sbjct: 131 PERIG 135
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +2
Query: 485 RSVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAH 664
+S Y+ +G V+ Y +T Q+F ++ + +++ + V LL+G K DLE QR +
Sbjct: 77 QSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKF-AAPNVVKLLIGTKCDLEDQRAI-E 134
Query: 665 AEGAALAQ 688
AE A + Q
Sbjct: 135 AEEAEMLQ 142
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
L + + + F +Y PT+ D Y + + P L + DTAG E + +R L
Sbjct: 19 LLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPL 70
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
L + F F + Y PT+ + Y +IEVD L + DTAG E + +R L
Sbjct: 21 LLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPL 72
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
L + + + F +Y PT+ D Y + + P L + DTAG E + +R L
Sbjct: 16 LLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPL 67
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
L + F F + Y PT+ + Y +IEVD L + DTAG E + +R L
Sbjct: 21 LLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPL 72
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 36.3 bits (80), Expect = 0.025
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 363 FMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQA 512
F KY TIED + +E + P L+ILDT F MR L I + A
Sbjct: 42 FSSKYKETIEDLHSREFRIQGVPLPLDILDT--NFNFPDMRRLSIASASA 89
Score = 35.5 bits (78), Expect = 0.044
Identities = 15/50 (30%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 506 SGFVVVYSLTNHQTFQDIKPM-KELITRVKGSERVPILLVGNKADLEHQR 652
S F++V+S+ + +F+++ + +E+ +R +PI++VGNK D+E+++
Sbjct: 88 SAFLLVFSVDDVTSFKEMSDIWQEICSRRSDLNELPIVVVGNKCDVENKK 137
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 35.5 bits (78), Expect = 0.044
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQREVAHAEG 673
Y+ G VVVY +TN ++F ++K + I + V +LVGNK + +R V ++
Sbjct: 80 YRGTHGVVVVYDVTNGESFGNVKRWLQEIE--NNCDSVQKVLVGNKCEENERRVVLESDA 137
Query: 674 AALAQ 688
AQ
Sbjct: 138 RNYAQ 142
Score = 35.1 bits (77), Expect = 0.058
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIK 500
+L ++F F E Y TI DF + ++++ L+I DTAG E+F ++ Y +
Sbjct: 25 SLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYR 81
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 35.1 bits (77), Expect = 0.058
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
L + + + F +Y PT+ D Y + P L + DTAG E + +R L
Sbjct: 19 LLISYTTNKFPSEYVPTVFDNYAVTAMIGGEPYTLGLFDTAGQEDYDRLRPL 70
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
+ + + + F +Y PT+ D Y ++ +D + L + DTAG E + +R L
Sbjct: 23 MLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQEDYDRLRPL 74
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKP-MKELITR-VKGSERVPILLVGNKADLEHQREVAHA 667
Y+ + V VY +T ++F D+ +KE + G VP +L+GNK D+E V+
Sbjct: 171 YRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDVECTNRVSTD 230
Query: 668 EGAALA 685
E A
Sbjct: 231 EAQMFA 236
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
+ + + + F +Y PT+ D Y ++ +D + L + DTAG E + +R L
Sbjct: 23 MLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQEDYDRLRPL 74
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +2
Query: 518 VVYSLTNHQTFQDIKPMKELITR-VKGSER-VPILLVGNKADLEHQREVA 661
+VY +TN ++F++ ++ + K SE V ++L+GNK DLE +R V+
Sbjct: 114 LVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVVS 163
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 491
+L V + F++ Y T+ D + + +DN + + DTAG + +R L
Sbjct: 19 SLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDTAGQGNYEQIRCL 71
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 512 FVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADL 640
F+V +S+ + +T + + R + VPI+LVG K DL
Sbjct: 79 FLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKNDL 121
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 336 LTVQFVSGCFMEK-YDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 509
L +++ G F+ + T+ D+ K I + + L+I DTAG E+F S+ Y ++
Sbjct: 18 LLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDAD 77
Query: 510 AL 515
AL
Sbjct: 78 AL 79
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 336 LTVQFVSGCFMEK-YDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 509
L +++ G F+ + T+ D+ K I + + L+I DTAG E+F S+ Y ++
Sbjct: 18 LLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDAD 77
Query: 510 AL 515
AL
Sbjct: 78 AL 79
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 345 QFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQAL 515
+F F + TI DF + IE+D L+I DTAG E+F ++ Y + +
Sbjct: 27 RFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGI 84
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 494 YKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNK 631
Y+ G ++VY +TN ++F++IK I S+ V +++GNK
Sbjct: 78 YRGAMGIILVYDITNERSFENIKNWIRNIEEHAASD-VERMIIGNK 122
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 333 ALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 509
+L ++FV F + TI DF + +D + L I DTAG E+F ++ Y + Q
Sbjct: 26 SLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQ 85
Query: 510 AL 515
+
Sbjct: 86 GV 87
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 0.71
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +2
Query: 512 FVVVYSLTNHQTFQDIKP--MKELITRVKGSERVPILLVGNKADLEHQ---REVAHAEGA 676
FV+VYS+ + Q+F+D+ E+ R G++ ++LVG +AD Q V G
Sbjct: 84 FVIVYSVVDLQSFEDVSHHWYPEVTKRNPGTK---LILVGTQADQRWQVRGNTVTQLRGK 140
Query: 677 ALAQMWG 697
ALA G
Sbjct: 141 ALADRLG 147
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 342 VQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQAL 515
++FV F + TI DF + +D + L I DTAG E+F ++ Y + Q +
Sbjct: 2 LRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGV 60
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 512 FVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQRE 655
F+V ++L N +F++++ K PI+LVG KADL R+
Sbjct: 78 FLVCFALNNPASFENVRA-KWYPEVSHHCPNTPIILVGTKADLREDRD 124
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 336 LTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAG 461
L ++F + E Y TI DF + IE+D L+I DTAG
Sbjct: 27 LLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 512 FVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQRE 655
F+V ++L N +F++++ K PI+LVG KADL R+
Sbjct: 78 FLVCFALNNPASFENVRA-KWYPEVSHHCPNTPIILVGTKADLREDRD 124
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = +2
Query: 515 VVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQR 652
++++ +T T++++ + RV E +PI+L GNK D++ ++
Sbjct: 86 IIMFDVTARVTYKNVPNWHRDLARV--CENIPIVLCGNKVDVKDRK 129
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 351 VSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 509
++G F +KY T+ + + + + DTAG E+F +RD Y GQ
Sbjct: 30 LTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQ 83
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 345 QFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQAL 515
+F F + TI DF K IE+ L+I DTAG E+F ++ Y + +
Sbjct: 28 RFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGI 85
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 488 SVYKKWSGFVVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNK 631
S Y+ G ++VY +TN ++F +I I SE V +++GNK
Sbjct: 77 SYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDE-HASEDVVKMILGNK 123
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = +2
Query: 515 VVVYSLTNHQTFQDIKPMKELITRVKGSERVPILLVGNKADLEHQR 652
++++ +T T++++ + RV E +PI+L GNK D++ ++
Sbjct: 20 IIMFDVTARVTYKNVPNWHHDLARV--CENIPIVLCGNKVDVKDRK 63
>Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 375 YDPTIEDFYRKEI-EVDNSPCVLEILDTAGTEQFA--SMRDLYIKNGQA 512
Y+PTIED Y+ + E D + +L + DTAG + ++ Y++ A
Sbjct: 200 YEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELKKAYVQAADA 248
>Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical
protein F52A8.6c protein.
Length = 199
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 375 YDPTIEDFYRKEI-EVDNSPCVLEILDTAGTEQFA--SMRDLYIKNGQA 512
Y+PTIED Y+ + E D + +L + DTAG + ++ Y++ A
Sbjct: 35 YEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELKKAYVQAADA 83
>Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 375 YDPTIEDFYRKEI-EVDNSPCVLEILDTAGTEQFA--SMRDLYIKNGQA 512
Y+PTIED Y+ + E D + +L + DTAG + ++ Y++ A
Sbjct: 200 YEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELKKAYVQAADA 248
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 393 DFYRKEIEVDNSPCV-LEILDTAGTEQFASMRDLYIKNGQ 509
DF K +++++ + L++ DTAG E+F + YI++ +
Sbjct: 42 DFKHKIVQLNDGQSIRLQLWDTAGQERFRQLAPAYIRSAR 81
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 518 VVYSLTNHQTFQDIKPMKELITRVKGSE--RVPILLVGNKAD 637
VVYS+T+ T I+ + R E P++LVGNK+D
Sbjct: 85 VVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKSD 126
>U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical
protein C47C12.4 protein.
Length = 398
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 518 VVYSLTNHQTFQDIKPMKELITRVKGSE--RVPILLVGNKAD 637
VVYS+T+ T I+ + R E P++LVGNK+D
Sbjct: 25 VVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKSD 66
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical protein
F59F3.5 protein.
Length = 1199
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 224 HTVRYKMSLLCWFMTHSDAITELHLLKLIDKHRRHFSS 111
H YK+ +CW + D T +KL H ++F+S
Sbjct: 1130 HKDVYKIMKMCWQASPDDRPTFAECIKLFKNHIQYFAS 1167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,381,711
Number of Sequences: 27780
Number of extensions: 379934
Number of successful extensions: 1049
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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