Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1891
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 113 1e-25
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 105 3e-23
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 103 1e-22
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 93 2e-19
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 73 2e-13
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 72 4e-13
04_04_0114 + 22861300-22861476,22864952-22864969,22865187-22867163 33 0.24
01_05_0102 - 18131640-18131655,18132928-18133046,18133186-181333... 33 0.32
03_01_0536 - 4020235-4021161,4022760-4022808,4023203-4023267 31 0.74
02_04_0606 + 24297392-24299241,24299424-24299484,24299626-24300087 31 0.74
02_05_0797 - 31805956-31806902,31806992-31807505 31 1.3
12_02_1186 + 26791153-26791666,26791906-26792025,26792303-26792409 30 1.7
11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166 30 2.3
03_06_0680 - 35497868-35497884,35498058-35501961 29 3.0
11_03_0149 + 10787332-10787454,10787776-10788529,10790406-107904... 29 5.2
09_06_0251 - 21859484-21862162 29 5.2
09_03_0158 - 12878690-12879687,12880115-12880178,12880580-12880645 29 5.2
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 28 6.9
05_02_0104 - 6638018-6638599,6639284-6639632,6641843-6642048 28 6.9
01_06_1378 + 36788283-36789734 28 6.9
01_04_0043 + 15375459-15377606 28 6.9
08_02_1247 + 25578291-25578305,25579084-25579197,25579497-255796... 28 9.1
08_02_0168 - 13640894-13641973 28 9.1
04_03_0366 + 14952725-14952902,14953230-14953429 28 9.1
03_02_0359 - 7788382-7788522,7788931-7789837,7791227-7791337,779... 28 9.1
02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,444... 28 9.1
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651 28 9.1
01_01_0628 - 4731052-4731601,4731825-4732782,4733143-4733953,473... 28 9.1
01_01_0025 + 188915-189132,190625-190705,191350-191506,191958-19... 28 9.1
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 113 bits (272), Expect = 1e-25
Identities = 51/79 (64%), Positives = 62/79 (78%)
Frame = +2
Query: 5 GIKPHQCLPITLDVGTDNQDLLEDPLYIGLRQKRARGKEYDEFIDEFMEACVQRYGQNTL 184
G++P CLPIT+DVGT+N+DLL+D YIGLRQKRA G+EY + +DEFM A Q YGQ L
Sbjct: 201 GVRPSACLPITIDVGTNNEDLLKDEFYIGLRQKRATGQEYSDLLDEFMAAIKQNYGQKVL 260
Query: 185 LQFEDFALPNAGRLLKKYR 241
+QFEDFA NA LL+KYR
Sbjct: 261 VQFEDFANYNAFTLLEKYR 279
Score = 80.2 bits (189), Expect = 2e-15
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +3
Query: 516 KAFGKDIEPEKDFEACVAKIKPSCLIGCSTVGGAFTPNVLKQMAMNTERPVIFALSNPTS 695
K + + EP KD V IKP+ LIG + VG +FT V++ M+ ERP+I ALSNPTS
Sbjct: 373 KRYAHEHEPVKDLLDAVKVIKPTALIGSAGVGQSFTKEVIEAMSSINERPIILALSNPTS 432
Query: 696 KAECTAQDAYDHTEGRCI 749
++ECTA+ AY ++GR I
Sbjct: 433 QSECTAEQAYSWSKGRAI 450
Score = 65.7 bits (153), Expect = 4e-11
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 250 LQFNDDIQGTASVAVAGLMAAVRVTRRKLSENIYLFLGAGSAANGIANLTVAAMMADG-L 426
L FNDDIQGTA+V +AGL+AA + L+++ +LF GAG A GIA L + +
Sbjct: 283 LVFNDDIQGTAAVVLAGLIAAQKFVSGTLADHTFLFFGAGEAGTGIAELVALEISNQSKV 342
Query: 427 SERQARERVYMFDVDGLLSTRRE 495
AR+++++ D GL+ + R+
Sbjct: 343 PVEDARKKIWLLDSKGLIVSSRK 365
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 105 bits (253), Expect = 3e-23
Identities = 48/82 (58%), Positives = 59/82 (71%)
Frame = +2
Query: 5 GIKPHQCLPITLDVGTDNQDLLEDPLYIGLRQKRARGKEYDEFIDEFMEACVQRYGQNTL 184
G++P CLPIT+DVGT+N+ LL D YIGLRQ+RA GKEY E ++EFM A Q YG+ L
Sbjct: 267 GVRPSACLPITIDVGTNNEQLLNDEFYIGLRQRRATGKEYHELMEEFMSAVKQIYGEKVL 326
Query: 185 LQFEDFALPNAGRLLKKYRNKY 250
+QFEDFA NA LL KY +
Sbjct: 327 IQFEDFANHNAFDLLAKYSKSH 348
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 250 LQFNDDIQGTASVAVAGLMAAVRVTRRKLSENIYLFLGAGSAANGIANLTVAAMMADGLS 429
L FNDDIQGTASV +AGL+++++V L+E+ YLFLGAG A GIA L + +
Sbjct: 349 LVFNDDIQGTASVVLAGLLSSLKVVGGTLAEHTYLFLGAGEAGTGIAELIALEISKQTKA 408
Query: 430 E-RQARERVYMFDVDGLLSTRREGGVPGTPRP 522
+ R++V++ D GL+ R+ + +P
Sbjct: 409 PIEECRKKVWLLDSKGLIVNSRKESLQAFKKP 440
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/76 (34%), Positives = 34/76 (44%)
Frame = +3
Query: 477 IVHST*RRGSGHAKAFGKDIEPEKDFEACVAKIKPSCLIGCSTVGGAFTPNVLKQMAMNT 656
IV+S K + + EP V IKP+ LIG S VG FT V++ MA
Sbjct: 426 IVNSRKESLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFN 485
Query: 657 ERPVIFALSNPTSKAE 704
E +FA +P E
Sbjct: 486 EGRAVFASGSPFDPVE 501
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 103 bits (248), Expect = 1e-22
Identities = 46/82 (56%), Positives = 59/82 (71%)
Frame = +2
Query: 5 GIKPHQCLPITLDVGTDNQDLLEDPLYIGLRQKRARGKEYDEFIDEFMEACVQRYGQNTL 184
G++P CLPIT+DVGT+N+ LL D YIGL+Q+RA G+EY E ++EFM A Q YG+ L
Sbjct: 198 GVRPSACLPITIDVGTNNESLLNDEFYIGLKQRRATGEEYHELLEEFMTAVKQNYGEKVL 257
Query: 185 LQFEDFALPNAGRLLKKYRNKY 250
+QFEDFA NA LL KY +
Sbjct: 258 VQFEDFANHNAFDLLAKYSKSH 279
Score = 80.2 bits (189), Expect = 2e-15
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +3
Query: 444 RESVHVRRRRTIVHST*RRGSGHAKA-FGKDIEPEKDFEACVAKIKPSCLIGCSTVGGAF 620
R+ V + R ++ + + H K F + EP K V IKP+ LIG S VG F
Sbjct: 345 RKKVWLVDSRGLIVESRKESLQHFKQPFAHEHEPVKTLLEAVQSIKPTVLIGTSGVGKTF 404
Query: 621 TPNVLKQMAMNTERPVIFALSNPTSKAECTAQDAYDHTEGRCI 749
T V++ MA E+PVIFALSNPTS +ECTA++AY T+G +
Sbjct: 405 TQEVVEAMAAFNEKPVIFALSNPTSHSECTAEEAYTWTKGSAV 447
Score = 72.1 bits (169), Expect = 4e-13
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = +1
Query: 250 LQFNDDIQGTASVAVAGLMAAVRVTRRKLSENIYLFLGAGSAANGIANLTVAAMMAD-GL 426
L FNDDIQGTASV +AGL+AA++V L+++ YLFLGAG A GIA L M +
Sbjct: 280 LVFNDDIQGTASVVLAGLIAALKVVGGTLADHTYLFLGAGEAGTGIAELIALEMSKQTEI 339
Query: 427 SERQARERVYMFDVDGLLSTRREGGVPGTPRPSGRISNRRKTSRPALPRSSLAVLL 594
R++V++ D GL+ R+ + +P KT A+ VL+
Sbjct: 340 PINDCRKKVWLVDSRGLIVESRKESLQHFKQPFAHEHEPVKTLLEAVQSIKPTVLI 395
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 93.5 bits (222), Expect = 2e-19
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +2
Query: 2 AGIKPHQCLPITLDVGTDNQDLLEDPLYIGLRQKRARGKEYDEFIDEFMEACVQRYGQNT 181
AGI P + LP+ +DVGT+N+ LL+DPLY+GL++ R G+EY IDEFMEA R+ N
Sbjct: 259 AGINPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRLEGEEYVAIIDEFMEAVFARW-PNV 317
Query: 182 LLQFEDFALPNAGRLLKKYRNKY 250
++QFEDF A RLL++YR Y
Sbjct: 318 IVQFEDFQSKWAFRLLQRYRKTY 340
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 VAKIKPSCLIGCSTVGGAFTPNVLKQMA-MNTERPVIFALSNPTSKAECTAQDAY 725
V K+KP ++G S VGG F+ VL+ + ++ RP IFA+SNPT AECT ++A+
Sbjct: 434 VKKVKPDVILGLSAVGGLFSKEVLEALKDSSSSRPAIFAMSNPTKNAECTPEEAF 488
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = +3
Query: 516 KAFGKDIEPEKDFEACVAKIKPSCLIGCSTVGGAFTPNVLKQMAMNTERPVIFALSNPTS 695
K + + EP + V IKP+ LIG S G FT V++ ++ ERPVIFALSNPTS
Sbjct: 361 KPWAHEHEPVGNLLDAVKTIKPTVLIGTSGKGQTFTQEVVEAISSFNERPVIFALSNPTS 420
Query: 696 KAECTAQDAYDHTEGRCI 749
++ECTA+ AY ++GR +
Sbjct: 421 QSECTAEQAYTWSKGRAV 438
Score = 71.7 bits (168), Expect = 6e-13
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +1
Query: 250 LQFNDDIQGTASVAVAGLMAAVRVTRRKLSENIYLFLGAGSAANGIANLTVAAMMADGLS 429
L FNDDIQGTASV ++GL+AA+++ LSE+ YLFLGAG A GIA L + +
Sbjct: 271 LVFNDDIQGTASVVLSGLVAALKLVGGSLSEHSYLFLGAGEAGTGIAELIALEISRQTKA 330
Query: 430 E-RQARERVYMFDVDGLL-STRRE 495
+ R+++++ D GL+ S+R+E
Sbjct: 331 PIEECRKKIWLVDSKGLIVSSRKE 354
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +2
Query: 119 EYDEFIDEFMEACVQRYGQNTLLQFEDFALPNAGRLLKKY 238
EY +F+ EFM A Q YG+ L+QFEDFA NA LL KY
Sbjct: 227 EYADFLHEFMTAVKQNYGEKVLIQFEDFANHNAFELLAKY 266
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +2
Query: 2 AGIKPHQCLPITLDVGTDNQDLLEDPLYIGLRQKRARGKEYDEFIDEFMEACVQRY 169
AGI P + LPI LDVGT+N LLED LY+GLRQ R G+EY +DEFMEA R+
Sbjct: 222 AGINPQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHARW 277
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +3
Query: 564 VAKIKPSCLIGCSTVGGAFTPNVLKQMA-MNTERPVIFALSNPTSKAECTAQDAYDH 731
V K+KP L+G S VGG F VLK M ++ RP IFA+SNPT+KAECT +D + +
Sbjct: 422 VRKVKPHVLLGLSGVGGIFNEEVLKAMKESDSPRPAIFAMSNPTTKAECTPEDVFKY 478
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = +1
Query: 268 IQGTASVAVAGLMAAVRVTRRKLSE---NIYLFLGAGS 372
+QGTA VA+AGL+ AVR R LS+ + +GAGS
Sbjct: 282 VQGTAGVALAGLLGAVRAQGRPLSDFTKQKIVVVGAGS 319
>04_04_0114 + 22861300-22861476,22864952-22864969,22865187-22867163
Length = 723
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Frame = +3
Query: 237 TAINTAVQRRHPRYGQRCRRR--SDGGRQGHE---EEAQ*EHLPFPRCWICSERHRELDC 401
TA T+ QR HPR+ ++CR + S G R + P C +E C
Sbjct: 314 TATTTSEQRNHPRHPKKCRFKGCSKGARGASGLCIAHGGGQRCHKPGCHKGAESSTAY-C 372
Query: 402 GRHDGGRTLREAGPRESVHVRRRRTIVHST*RR 500
H GGR E G +S + I H RR
Sbjct: 373 KAHGGGRRCEELGCTKSAEGKTDYCIAHGGGRR 405
>01_05_0102 -
18131640-18131655,18132928-18133046,18133186-18133300,
18134072-18134325
Length = 167
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 371 DPAPRKR*MFSLSFLLVTLTAAIRPATA---TLAVPWMSSLNCSIY 243
DP ++ MF L F L + TA I P TA L VP + CS Y
Sbjct: 59 DPTQDQKLMFGLLFSLRSFTAKIDPTTAEKGNLGVPLLPGQGCSFY 104
>03_01_0536 - 4020235-4021161,4022760-4022808,4023203-4023267
Length = 346
Score = 31.5 bits (68), Expect = 0.74
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 521 GLGVPGTPPSRRVDNSPSTSNMYTLSRACLSESPSAIMAA--TVKF 390
G P TPPS + S + SR+CLS++PS A TV+F
Sbjct: 204 GKRAPATPPSATAGAESACSTASSYSRSCLSKTPSTRGQAKRTVRF 249
>02_04_0606 + 24297392-24299241,24299424-24299484,24299626-24300087
Length = 790
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +1
Query: 514 PRPSGRISNRRKTSRPALPRSSLAVLLVVQRWAALSRPMY*SKWR*TPSDPSYSHSRIRP 693
P P+ R + +PA PR S +V + R A + PM P P+ S + P
Sbjct: 164 PGPAAIAKMRDEVDQPATPRRSRSVAPMSPRSVAPAAPMTPMSTSARPMTPTMSARPMTP 223
Query: 694 VKLSAQPKTP 723
+SA+P TP
Sbjct: 224 --MSARPMTP 231
>02_05_0797 - 31805956-31806902,31806992-31807505
Length = 486
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -1
Query: 563 AGLEVFLRFDILPEGLGVPGTPPSRRVDNSPSTSNMYTLSRACLSESPSAIMA 405
AGL+ F RF+ +P+GL PP DN T ++ T+ + L+ P+A A
Sbjct: 59 AGLDDF-RFETIPDGL-----PPPSESDNDDVTQDIPTVCTSFLTHGPAAFGA 105
>12_02_1186 + 26791153-26791666,26791906-26792025,26792303-26792409
Length = 246
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = -3
Query: 471 VDVEHVHSLAGLPLGESVRHHGGHSQVRDAVRCRSSTEEKVNV---LTELPPRDPDGRHQ 301
+ V+ VHS+ L G GG + + R E++ V + +PPR+PD
Sbjct: 16 IPVDVVHSVVALAAGGG--GGGGDALHPERERALHPAEDRGGVALAVEVVPPREPDDEQG 73
Query: 300 TGDGNAG--RTLDVVV 259
TG G+ G D+VV
Sbjct: 74 TGAGHGGEEEETDIVV 89
>11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166
Length = 940
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = -3
Query: 429 GESVRHHGGHSQVRDAVRCRSSTEEKVNVLTELPPRDPDGRHQTGDGNAGR 277
G +H H RCR + E+KV V + R GR GDG R
Sbjct: 827 GLEEQHRQLHGDEHKLERCRRAHEKKVEVKVDPIGRTAAGRRSKGDGIRNR 877
>03_06_0680 - 35497868-35497884,35498058-35501961
Length = 1306
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 517 RPSGRISNRRKTSRPALPRSSLAVLLVVQRWAALS 621
+ SGR+S +++ PAL L L V QRW A++
Sbjct: 890 KSSGRVSTVCRSAFPALKEMKLCDLSVFQRWEAVN 924
>11_03_0149 +
10787332-10787454,10787776-10788529,10790406-10790473,
10791254-10791421
Length = 370
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -3
Query: 489 SSGQ*SVDVEHVHSLAGLPLGESVRHHGGHSQVRDAVRCRSSTEEKVNVLTELPPRDPDG 310
+ GQ D E V + G GE GHS +R+ RC + +K NV + P G
Sbjct: 79 NGGQPKGDNEMVPRVLGFNQGEE-----GHSALRNPNRCHVPSSDKANVAADKAPNQSLG 133
>09_06_0251 - 21859484-21862162
Length = 892
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -3
Query: 282 GRTLDVVVELQYLLRYFFRSRPAFGRAKSSNWSRVFCPYL 163
G T ++ LQ L YF RPA G A S+W+RV YL
Sbjct: 744 GVTALLLAGLQPLNAYFRPKRPANGEA--SSWNRVLWEYL 781
>09_03_0158 - 12878690-12879687,12880115-12880178,12880580-12880645
Length = 375
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 77 PLYIGLRQKRARGKEYDEFIDEFMEACVQR 166
PL++G R KR R K +D+F +++ + R
Sbjct: 68 PLFLGTRPKRLRSKVWDDFTPIYIDGKLAR 97
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 538 SISFPKALACPEPLLHVEWTIVRRRRTCTLSR 443
+++F KA A P+P+L WT + RT L R
Sbjct: 25 AVAFFKASALPQPVLAQIWTYADKNRTGFLGR 56
>05_02_0104 - 6638018-6638599,6639284-6639632,6641843-6642048
Length = 378
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -3
Query: 453 HSLAGLPLGESVRHHGGHSQVRDAVRCRSSTEEKVNVLTELPPRDPD 313
H G P G R GG + R R R E ++L +L P PD
Sbjct: 255 HPAVGAPTGN--RRRGGDASRRLRRRRRPEAAEPASLLADLAPSQPD 299
>01_06_1378 + 36788283-36789734
Length = 483
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/82 (26%), Positives = 34/82 (41%)
Frame = -1
Query: 629 IGRESAAHR*TTNKTARLDLGNAGLEVFLRFDILPEGLGVPGTPPSRRVDNSPSTSNMYT 450
+G SAA T +D +G+ V R D+ P+G G + V + P S Y
Sbjct: 11 VGAASAASPIVTKSLVGVDAPASGITVVSRQDVRPDGASAVG-DLTLSVSDLPMLSCHY- 68
Query: 449 LSRACLSESPSAIMAATVKFAM 384
+ + +P MA+ V M
Sbjct: 69 IQKGLFFPAPDVPMASLVSLLM 90
>01_04_0043 + 15375459-15377606
Length = 715
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 312 GRHQTGDGNAGRTLDVVVELQYLLRY 235
GRH GDG+ G D VV L RY
Sbjct: 555 GRHDDGDGDGGGDSDTVVVATRLSRY 580
>08_02_1247 +
25578291-25578305,25579084-25579197,25579497-25579628,
25579726-25579854,25580024-25580421,25580503-25580602,
25580734-25580793,25580881-25580967,25581058-25581186,
25581260-25581559
Length = 487
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 571 LATQASKSFSGSISFPKALACPEPLLH 491
L T KS SGS P AL PEPL H
Sbjct: 350 LFTPLKKSASGSSIHPYALHPPEPLAH 376
>08_02_0168 - 13640894-13641973
Length = 359
Score = 27.9 bits (59), Expect = 9.1
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +3
Query: 78 LYTSV*DKNAPGE--RNTTSSSMSSWRPVYRDTDRTLCSNLRISPFRMPVGS*RNTAINT 251
+YT K++ G+ RN + +S PV++ + S+ R P+ G R +
Sbjct: 221 VYTFDMQKSSGGDQTRNHGDKNSNSGGPVHKKS-----SSQRHHPYHGGTGQPRAQGGSN 275
Query: 252 AVQRRHPR--YGQRCRRRSDGGRQGHEEEAQ*EHLPFPRCWICSERHRELDCGRHDGGRT 425
R P+ G C R D R+ A +C ICS+ H+++ C ++ G+
Sbjct: 276 TKYRAFPKPGMGMVCFRCGDAHRRTECRWAG-------KCSICSQDHKDVVCRKNPNGKL 328
Query: 426 LREA 437
EA
Sbjct: 329 RWEA 332
>04_03_0366 + 14952725-14952902,14953230-14953429
Length = 125
Score = 27.9 bits (59), Expect = 9.1
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +1
Query: 361 GAGSAANGIANLTVAAMMADGLSERQARERVYMFDVDGLLSTRREGGVPGTPRPSGRISN 540
G+ AA+G+ AA S+ ARE GL RR G V +G I+
Sbjct: 16 GSVEAASGVGGSVEAAASVAAASD-SAREESAKGGGAGLGGGRRRGPVTDDSSVTGSITE 74
Query: 541 RRKTSRPALPRSSL 582
T RP SS+
Sbjct: 75 IEMTFRPVTDDSSM 88
>03_02_0359 -
7788382-7788522,7788931-7789837,7791227-7791337,
7791437-7791507,7791582-7791659,7792564-7792770,
7792867-7793046,7793249-7793471,7794133-7794453,
7794538-7795109
Length = 936
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 369 SSTEEKVNV-LTELPPRDPDGRHQTGDGN 286
S EE +N+ +LP +D D RH T D N
Sbjct: 854 SDIEEGLNLPFADLPQKDEDARHGTSDTN 882
>02_01_0598 +
4440018-4440070,4440627-4440693,4440794-4440926,
4441075-4441120,4442470-4442521,4442601-4442753,
4443338-4443457,4443549-4443714,4443822-4443934,
4444049-4444120,4444992-4445213,4445270-4445317,
4445639-4445697,4445809-4445887,4445982-4446119,
4446327-4446551,4446643-4447430,4447548-4447723,
4447911-4448169,4448646-4448707,4451055-4451212,
4451618-4451743,4452197-4452260,4452386-4452494,
4452607-4452760,4453055-4453178,4453257-4453333,
4453442-4453494,4453673-4453727,4453833-4454021
Length = 1379
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 542 RFDILPEGLGVPGTPPSRRVDNSPSTSNMY 453
RFD LP+ L G P D P T+N+Y
Sbjct: 172 RFDELPDELDPIGKLPGSFDDGDPQTTNLY 201
>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
Length = 187
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 330 EAQ*EHLPFPRCWICSERHRELDCGR-HDGGRTLREAGPRESVHVRRRRTIV 482
+ Q + F +C + +R + ++ R HDGG + AGP + +R + V
Sbjct: 134 DGQINYEEFVKCMMAKKRRKRIEEKRDHDGGSRTKSAGPSAAPASKRGQKCV 185
>01_01_0628 -
4731052-4731601,4731825-4732782,4733143-4733953,
4734038-4734241,4734695-4734802,4735930-4736369,
4736463-4736541
Length = 1049
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 273 LDVVVELQYLL-RYFFRSRPAFG 208
L V+EL ++L +YFFR RP FG
Sbjct: 849 LQRVMELPFVLPKYFFRVRPCFG 871
>01_01_0025 +
188915-189132,190625-190705,191350-191506,191958-192161,
192248-192356,192401-192496,192724-193994,194200-194384,
194619-195055,197034-197077,197830-199036,199253-199479
Length = 1411
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 273 LDVVVELQYLL-RYFFRSRPAFG 208
L V+EL ++L +YFFR RP FG
Sbjct: 756 LQRVMELPFVLPKYFFRVRPCFG 778
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,707,638
Number of Sequences: 37544
Number of extensions: 586062
Number of successful extensions: 2063
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2056
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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