Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1890
         (780 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.6  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   3.5  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     25   3.5  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -3

Query: 364  SCRRGAGILFPTTACHGPHSLRGRDSWTPEGSH 266
            SC R AG  F  T+     S   R S +  GSH
Sbjct: 1330 SCERIAGETFECTSTSSKFSTSSRGSGSDSGSH 1362


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = -1

Query: 621 VGNVRRPHDPPDLFHSLPGPATDRRDNRRFSRQLSPQRKTVEAVCERLP*F 469
           V N+     PP  + S  G   D+ DN     ++SP     + V    P F
Sbjct: 262 VPNIPNTETPPPGYMSEDGDPLDQNDNMTDLSRMSPSEMDTQPVMYHEPTF 312


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 182 ILLELEAPLKICGDIHGQYYDLLRCLSMVASLRSPTISSSE 304
           I+ +L+    +  +  G YY L  CLS + S RS T+S  E
Sbjct: 134 IIADLDTNSALKKNQWGSYY-LKGCLSFIPSKRSITVSWDE 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,209
Number of Sequences: 2352
Number of extensions: 19536
Number of successful extensions: 44
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)