Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1890
(780 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 22 0.79
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 24 1.8
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 4.2
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 23 4.2
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 23 4.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 7.4
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.8 bits (44), Expect(2) = 0.79
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 319 HGPHSLRGRDSWTPEGS 269
HG H L G S P GS
Sbjct: 138 HGLHGLHGLSSSAPTGS 154
Score = 21.4 bits (43), Expect(2) = 0.79
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 391 KERNSRDI*SCRRGAGILFPTTACHGPHSLRG 296
KE+ SR+ RR L T HG H L G
Sbjct: 111 KEQLSREQRFLRRRLEQLTNQTGLHGLHGLHG 142
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ ++ PG + + +PR H RL RE
Sbjct: 63 EAEPKAEPGNNRPIYIPQPRPPHPRLRRE 91
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 91 EAESEAEPGNNRPVYIPQPRPPHPRLRRE 119
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA + PG + + +PR H RL RE
Sbjct: 35 EAKPEAEPGNNRPIYIPQPRPPHPRLRRE 63
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 682 RPNRPCPCRGRTRASRRANPGRERP 608
+P P P R R A +A PG RP
Sbjct: 52 QPRPPHP-RLRREAEPKAEPGNNRP 75
Score = 21.4 bits (43), Expect = 9.7
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -3
Query: 664 PCRGRTRASRRANPGRERP 608
P R R A A PG RP
Sbjct: 29 PARLRREAKPEAEPGNNRP 47
Score = 21.4 bits (43), Expect = 9.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 682 RPNRPCPCRGRTRASRRANPGRERP 608
+P P P R R A A PG RP
Sbjct: 80 QPRPPHP-RLRREAESEAEPGNNRP 103
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 62 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 90
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 118 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 146
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 174 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 202
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 202 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 230
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 230 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 258
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 90 EAELEAEPGNNRPVYISQPRPPHPRLRRE 118
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 146 EAELEAEPGNNRPVYISQPRPPHPRLRRE 174
Score = 21.4 bits (43), Expect = 9.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA + PG + + +PR H RL RE
Sbjct: 34 EAKPEAEPGNNRPVYIPQPRPPHPRLRRE 62
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 35 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 63
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 63 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 91
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 91 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 119
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 34 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 62
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 62 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 90
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 90 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 118
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA+ + PG + + +PR H RL RE
Sbjct: 118 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 146
Score = 21.4 bits (43), Expect = 9.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA + PG + + +PR H RL RE
Sbjct: 6 EAKPEAEPGNNRPVYIPQPRPPHPRLRRE 34
Score = 21.4 bits (43), Expect = 9.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 600 EADGRSRPGFALRLALVRPRQGHGRLGRE 686
EA + PG + + +PR H RL RE
Sbjct: 146 EAKPEAEPGNNRPVYIPQPRPPHPRLRRE 174
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 5.6
Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 570 PGPATDRRDNRR-FSRQLSPQRKTVEAVCERLP*FNVI 460
P P T +++ + FS++ SP + V +R+P F+++
Sbjct: 225 PQPLTGQQELLQDFSKRFSPAIRGVVEFAKRIPGFSLL 262
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 7.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 371 IPRISFFYAETTSVP----ASIGFMGFTMSAKGGITLNYGRRSQTASTVF 508
I R + +Y VP AS+ +GFT+ G L+ G + TVF
Sbjct: 227 IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVF 276
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,625
Number of Sequences: 438
Number of extensions: 5340
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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