Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1885
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118687-1|AAM50547.1|  583|Drosophila melanogaster AT15352p pro...    29   7.1  
AE014296-2359|AAF49758.2|  583|Drosophila melanogaster CG8100-PA...    29   7.1  

>AY118687-1|AAM50547.1|  583|Drosophila melanogaster AT15352p
           protein.
          Length = 583

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 314 FLCIPCALMIRLHLDSVKIYIESFLNFF 397
           +L +P  L  RLHLDS K  ++S LN F
Sbjct: 470 YLSLPNQLRPRLHLDSFKCSLKSGLNHF 497


>AE014296-2359|AAF49758.2|  583|Drosophila melanogaster CG8100-PA
           protein.
          Length = 583

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 314 FLCIPCALMIRLHLDSVKIYIESFLNFF 397
           +L +P  L +RLHLDS K  ++  LN F
Sbjct: 470 YLSLPNQLRLRLHLDSFKCSLKRGLNHF 497


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,130,893
Number of Sequences: 53049
Number of extensions: 398467
Number of successful extensions: 485
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)