Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1881
         (785 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084185-1|AAL89923.1|  224|Drosophila melanogaster RE67583p pro...    48   2e-05
AF276505-1|AAF85707.1|  224|Drosophila melanogaster neural Lazar...    48   2e-05
AE014134-249|AAF51378.2|  224|Drosophila melanogaster CG33126-PA...    48   2e-05
AY070838-1|AAL48460.2|  227|Drosophila melanogaster GH09946p pro...    38   0.021
AF276506-1|AAF85708.1|  212|Drosophila melanogaster glial Lazari...    38   0.021
AE013599-1646|AAF58418.1|  212|Drosophila melanogaster CG4604-PA...    38   0.021
AE014297-2056|AAN13668.1|  219|Drosophila melanogaster CG14872-P...    33   0.58 
BT025827-1|ABF85727.1|  175|Drosophila melanogaster IP07407p pro...    31   1.3  
AE014134-248|AAN10468.1|  192|Drosophila melanogaster CG31659-PA...    31   1.3  
BT022088-1|AAY33504.1|  787|Drosophila melanogaster RE03647p pro...    29   7.2  
BT010028-1|AAQ22497.1|  787|Drosophila melanogaster RE03551p pro...    29   7.2  
AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein...    29   7.2  
AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT prot...    29   7.2  
AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA...    29   7.2  
AF247768-1|AAF86228.1|  809|Drosophila melanogaster Toll-4 protein.    29   9.5  
AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-P...    29   9.5  

>AY084185-1|AAL89923.1|  224|Drosophila melanogaster RE67583p
           protein.
          Length = 224

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 75  EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKN 248
           +V   G CP++K ++ F+  AY G+WYE + +P   E   KC  A Y L +   V V N
Sbjct: 26  QVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVN 84



 Score = 35.1 bits (77), Expect = 0.11
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 377 VLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAS 511
           VL TDY +YA+ Y+C       + ++ VWIL+R ++   +A  A+
Sbjct: 126 VLGTDYESYAVVYSCTSVTPLANFKI-VWILTRQREPSAEAVDAA 169


>AF276505-1|AAF85707.1|  224|Drosophila melanogaster neural
           Lazarillo protein.
          Length = 224

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 75  EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKN 248
           +V   G CP++K ++ F+  AY G+WYE + +P   E   KC  A Y L +   V V N
Sbjct: 26  QVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVN 84



 Score = 35.1 bits (77), Expect = 0.11
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 377 VLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAS 511
           VL TDY +YA+ Y+C       + ++ VWIL+R ++   +A  A+
Sbjct: 126 VLGTDYESYAVVYSCTSVTPLANFKI-VWILTRQREPSAEAVDAA 169


>AE014134-249|AAF51378.2|  224|Drosophila melanogaster CG33126-PA
           protein.
          Length = 224

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 75  EVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGDVVKVKN 248
           +V   G CP++K ++ F+  AY G+WYE + +P   E   KC  A Y L +   V V N
Sbjct: 26  QVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNSTVSVVN 84



 Score = 35.1 bits (77), Expect = 0.11
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 377 VLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKTAS 511
           VL TDY +YA+ Y+C       + ++ VWIL+R ++   +A  A+
Sbjct: 126 VLGTDYESYAVVYSCTSVTPLANFKI-VWILTRQREPSAEAVDAA 169


>AY070838-1|AAL48460.2|  227|Drosophila melanogaster GH09946p
           protein.
          Length = 227

 Score = 37.5 bits (83), Expect = 0.021
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 365 GSVQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKT 505
           G  QVL TDY N+AI ++C        H   +WIL R++  E D ++
Sbjct: 154 GKYQVLYTDYENFAILWSCG-SIGSLGHSDQIWILGRDRDFEVDIRS 199



 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 90  GTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYK--LEGDVVKVKNVHSST 263
           G CP    +  FN++   G WYE+ +     E    C++ +++   +G+  K  N   + 
Sbjct: 46  GRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAV 105

Query: 264 ASRSI 278
           A ++I
Sbjct: 106 AIKNI 110


>AF276506-1|AAF85708.1|  212|Drosophila melanogaster glial Lazarillo
           protein.
          Length = 212

 Score = 37.5 bits (83), Expect = 0.021
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 365 GSVQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKT 505
           G  QVL TDY N+AI ++C        H   +WIL R++  E D ++
Sbjct: 139 GKYQVLYTDYENFAILWSCG-SIGSLGHSDQIWILGRDRDFEVDIRS 184



 Score = 29.9 bits (64), Expect = 4.1
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 90  GTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYK--LEGDVVKVKNVHSST 263
           G CP    +  FN++   G WYE+ +     E    C++ +++   +G+  K  N   + 
Sbjct: 31  GRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNSKLAV 90

Query: 264 ASRSI 278
           A ++I
Sbjct: 91  AIKNI 95


>AE013599-1646|AAF58418.1|  212|Drosophila melanogaster CG4604-PA
           protein.
          Length = 212

 Score = 37.5 bits (83), Expect = 0.021
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 365 GSVQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKLEGDAKT 505
           G  QVL TDY N+AI ++C        H   +WIL R++  E D ++
Sbjct: 139 GKYQVLYTDYENFAILWSCG-SIGSLGHSDQIWILGRDRDFEVDIRS 184



 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 90  GTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYK--LEGDVVKVKNVHSST 263
           G CP    +  FN++   G WYE+ +     E    C++ +++   +G+  K  N   + 
Sbjct: 31  GRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAV 90

Query: 264 ASRSI 278
           A ++I
Sbjct: 91  AIKNI 95


>AE014297-2056|AAN13668.1|  219|Drosophila melanogaster CG14872-PA,
           isoform A protein.
          Length = 219

 Score = 32.7 bits (71), Expect = 0.58
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 120 NFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKLEGDVVKV 242
           NFNLT   G WYE ++ PN         S   ++E D++ +
Sbjct: 47  NFNLTQLSGYWYEAARVPNVQVLECLNVSVPAEIENDILSL 87


>BT025827-1|ABF85727.1|  175|Drosophila melanogaster IP07407p
           protein.
          Length = 175

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 90  GTCPE-LKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEY 215
           G CP  +  V + ++  ++G WY  S +P+ S +  KC S ++
Sbjct: 8   GACPSNMTAVGDLDMDRFKGKWYTHSIYPHLSLRVEKCQSTDF 50


>AE014134-248|AAN10468.1|  192|Drosophila melanogaster CG31659-PA
           protein.
          Length = 192

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 90  GTCPE-LKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEY 215
           G CP  +  V + ++  ++G WY  S +P+ S +  KC S ++
Sbjct: 25  GACPSNMTAVGDLDMDRFKGKWYTHSIYPHLSLRVEKCQSTDF 67


>BT022088-1|AAY33504.1|  787|Drosophila melanogaster RE03647p
           protein.
          Length = 787

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +3

Query: 429 MTRKSLIKCSSGSSLETRSLKATLKLLR*FHQGTLQRDRLFETCAYRFFRGSLQIYQLQR 608
           + R   +  S  + + TRSLKA + +L     G      LF+   +R F+   Q++ ++R
Sbjct: 711 IVRACTLVLSDWADIPTRSLKAAVTILHRIAYGCKCAGMLFQAKLFRIFQ---QVFSVER 767

Query: 609 D 611
           D
Sbjct: 768 D 768


>BT010028-1|AAQ22497.1|  787|Drosophila melanogaster RE03551p
           protein.
          Length = 787

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +3

Query: 429 MTRKSLIKCSSGSSLETRSLKATLKLLR*FHQGTLQRDRLFETCAYRFFRGSLQIYQLQR 608
           + R   +  S  + + TRSLKA + +L     G      LF+   +R F+   Q++ ++R
Sbjct: 711 IVRACTLVLSDWADIPTRSLKAAVTILHRIAYGCKCAGMLFQAKLFRIFQ---QVFSVER 767

Query: 609 D 611
           D
Sbjct: 768 D 768


>AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein
           protein.
          Length = 1384

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +3

Query: 429 MTRKSLIKCSSGSSLETRSLKATLKLLR*FHQGTLQRDRLFETCAYRFFRGSLQIYQLQR 608
           + R   +  S  + + TRSLKA + +L     G      LF+   +R F+   Q++ ++R
Sbjct: 711 IVRACTLVLSDWADIPTRSLKAAVTILHRIAYGCKCAGMLFQAKLFRIFQ---QVFSVER 767

Query: 609 D 611
           D
Sbjct: 768 D 768


>AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT
           protein.
          Length = 1384

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +3

Query: 429 MTRKSLIKCSSGSSLETRSLKATLKLLR*FHQGTLQRDRLFETCAYRFFRGSLQIYQLQR 608
           + R   +  S  + + TRSLKA + +L     G      LF+   +R F+   Q++ ++R
Sbjct: 711 IVRACTLVLSDWADIPTRSLKAAVTILHRIAYGCKCAGMLFQAKLFRIFQ---QVFSVER 767

Query: 609 D 611
           D
Sbjct: 768 D 768


>AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA
           protein.
          Length = 1384

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +3

Query: 429 MTRKSLIKCSSGSSLETRSLKATLKLLR*FHQGTLQRDRLFETCAYRFFRGSLQIYQLQR 608
           + R   +  S  + + TRSLKA + +L     G      LF+   +R F+   Q++ ++R
Sbjct: 711 IVRACTLVLSDWADIPTRSLKAAVTILHRIAYGCKCAGMLFQAKLFRIFQ---QVFSVER 767

Query: 609 D 611
           D
Sbjct: 768 D 768


>AF247768-1|AAF86228.1|  809|Drosophila melanogaster Toll-4 protein.
          Length = 809

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -2

Query: 745 LWSLQSGSTNKTKTYVNL--NTVVTIQFDSPQCFKYLFSLNVFRVRLSRWS 599
           L SL      ++  Y+++  N + T+   SPQ  +YL+S+NVF    ++WS
Sbjct: 127 LTSLSVSQLPESLHYLDIRHNKITTL---SPQVVEYLYSVNVFNQYGNKWS 174


>AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-PA
           protein.
          Length = 1125

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -2

Query: 745 LWSLQSGSTNKTKTYVNL--NTVVTIQFDSPQCFKYLFSLNVFRVRLSRWS 599
           L SL      ++  Y+++  N + T+   SPQ  +YL+S+NVF    ++WS
Sbjct: 443 LTSLSVSQLPESLHYLDIRHNKITTL---SPQVVEYLYSVNVFNQYGNKWS 490


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,638,118
Number of Sequences: 53049
Number of extensions: 587045
Number of successful extensions: 1756
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)