Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1880
(729 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M32637-1|AAA28511.1| 199|Drosophila melanogaster protein ( D.me... 103 2e-22
M31902-1|AAA28509.1| 199|Drosophila melanogaster protein ( D.me... 103 2e-22
M31900-1|AAA28510.1| 199|Drosophila melanogaster protein ( D.me... 103 2e-22
AY069405-1|AAL39550.1| 199|Drosophila melanogaster LD10532p pro... 103 2e-22
AE014296-136|AAF47413.2| 199|Drosophila melanogaster CG1007-PA ... 103 2e-22
BT022167-1|AAY51561.1| 167|Drosophila melanogaster IP01307p pro... 31 1.6
AL031766-3|CAA21133.1| 167|Drosophila melanogaster EG:84H4.2,FB... 31 1.6
AE014298-653|AAF45967.1| 167|Drosophila melanogaster CG3052-PA ... 31 1.6
AE014298-1396|AAX52484.1| 150|Drosophila melanogaster CG33557-P... 31 2.1
L20770-1|AAA18517.1| 162|Drosophila melanogaster helix-loop-hel... 30 2.8
AE014298-470|AAF45830.1| 327|Drosophila melanogaster CG14418-PA... 30 3.7
>M32637-1|AAA28511.1| 199|Drosophila melanogaster protein (
D.melanogaster extramacrochaetaeprotein gene, exon 2. ).
Length = 199
Score = 103 bits (248), Expect = 2e-22
Identities = 52/71 (73%), Positives = 63/71 (88%), Gaps = 6/71 (8%)
Frame = +3
Query: 60 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 221
MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++
Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60
Query: 222 KLEVIQHVIDY 254
KLE+IQHVIDY
Sbjct: 61 KLEIIQHVIDY 71
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 257 CDLQSALENHQAVGQFDA 310
CDLQ+ LE H +G FDA
Sbjct: 73 CDLQTELETHPEMGNFDA 90
>M31902-1|AAA28509.1| 199|Drosophila melanogaster protein (
D.melanogaster extramacrochaetae(emc) protein mRNA,
complete cds. ).
Length = 199
Score = 103 bits (248), Expect = 2e-22
Identities = 52/71 (73%), Positives = 63/71 (88%), Gaps = 6/71 (8%)
Frame = +3
Query: 60 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 221
MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++
Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60
Query: 222 KLEVIQHVIDY 254
KLE+IQHVIDY
Sbjct: 61 KLEIIQHVIDY 71
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 257 CDLQSALENHQAVGQFDA 310
CDLQ+ LE H +G FDA
Sbjct: 73 CDLQTELETHPEMGNFDA 90
>M31900-1|AAA28510.1| 199|Drosophila melanogaster protein (
D.melanogaster extramacrochaetae(emc) protein gene, exon
2. ).
Length = 199
Score = 103 bits (248), Expect = 2e-22
Identities = 52/71 (73%), Positives = 63/71 (88%), Gaps = 6/71 (8%)
Frame = +3
Query: 60 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 221
MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++
Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60
Query: 222 KLEVIQHVIDY 254
KLE+IQHVIDY
Sbjct: 61 KLEIIQHVIDY 71
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 257 CDLQSALENHQAVGQFDA 310
CDLQ+ LE H +G FDA
Sbjct: 73 CDLQTELETHPEMGNFDA 90
>AY069405-1|AAL39550.1| 199|Drosophila melanogaster LD10532p
protein.
Length = 199
Score = 103 bits (248), Expect = 2e-22
Identities = 52/71 (73%), Positives = 63/71 (88%), Gaps = 6/71 (8%)
Frame = +3
Query: 60 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 221
MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++
Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60
Query: 222 KLEVIQHVIDY 254
KLE+IQHVIDY
Sbjct: 61 KLEIIQHVIDY 71
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 257 CDLQSALENHQAVGQFDA 310
CDLQ+ LE H +G FDA
Sbjct: 73 CDLQTELETHPEMGNFDA 90
>AE014296-136|AAF47413.2| 199|Drosophila melanogaster CG1007-PA
protein.
Length = 199
Score = 103 bits (248), Expect = 2e-22
Identities = 52/71 (73%), Positives = 63/71 (88%), Gaps = 6/71 (8%)
Frame = +3
Query: 60 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 221
MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++
Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60
Query: 222 KLEVIQHVIDY 254
KLE+IQHVIDY
Sbjct: 61 KLEIIQHVIDY 71
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 257 CDLQSALENHQAVGQFDA 310
CDLQ+ LE H +G FDA
Sbjct: 73 CDLQTELETHPEMGNFDA 90
>BT022167-1|AAY51561.1| 167|Drosophila melanogaster IP01307p
protein.
Length = 167
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 171 SKLQDLVPFMPKNRKISKLEVIQHVIDYSATFN 269
++L+ L+P +P ++K+SK+E+++ I Y A N
Sbjct: 129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLN 161
>AL031766-3|CAA21133.1| 167|Drosophila melanogaster
EG:84H4.2,FBgn0011277;HLH4C protein.
Length = 167
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 171 SKLQDLVPFMPKNRKISKLEVIQHVIDYSATFN 269
++L+ L+P +P ++K+SK+E+++ I Y A N
Sbjct: 129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLN 161
>AE014298-653|AAF45967.1| 167|Drosophila melanogaster CG3052-PA
protein.
Length = 167
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 171 SKLQDLVPFMPKNRKISKLEVIQHVIDYSATFN 269
++L+ L+P +P ++K+SK+E+++ I Y A N
Sbjct: 129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLN 161
>AE014298-1396|AAX52484.1| 150|Drosophila melanogaster CG33557-PA
protein.
Length = 150
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 177 LQDLVPFMPKNRKISKLEVIQHVIDY 254
L++L+P P NRK+SK+E+I+ Y
Sbjct: 84 LRNLIPTEPMNRKLSKIEIIRLASSY 109
>L20770-1|AAA18517.1| 162|Drosophila melanogaster helix-loop-helix
protein protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 135 RDGENAE-IQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYSATFN 269
R+G E + + ++ L+P +P ++K+SK+E+++ I Y A N
Sbjct: 111 REGIRVEAFNVSFADVRKLLPTLPPDKKLSKIEILKLAICYIAYLN 156
>AE014298-470|AAF45830.1| 327|Drosophila melanogaster CG14418-PA
protein.
Length = 327
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 322 SVATLRSVAAAPPSEETARPSPYAQHHPP-QITLHTRTQKSNGTRKTKPT 468
+VA L S +APP E P + PP ++ L KSNG++ + T
Sbjct: 30 TVAPLTSSTSAPPKMEVKPTKPMIVNAPPKKVQLTEAAPKSNGSKPLQVT 79
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,378,220
Number of Sequences: 53049
Number of extensions: 629043
Number of successful extensions: 2171
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2159
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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