Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1879
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 102 3e-22
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 99 2e-21
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 92 4e-19
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 67 1e-11
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 44 9e-05
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 44 9e-05
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 44 9e-05
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 36 0.033
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 31 0.93
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 31 0.93
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 31 0.93
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 31 0.93
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 31 0.93
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 31 0.93
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 31 0.93
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 31 0.93
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.2
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 30 1.6
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 30 2.2
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 30 2.2
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 30 2.2
U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81498-2|CAB04085.1| 760|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81498-1|CAB04086.1| 692|Caenorhabditis elegans Hypothetical pr... 28 6.6
U12682-1|AAB63525.1| 692|Caenorhabditis elegans celfurPC protei... 28 6.6
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 28 8.7
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 102 bits (245), Expect = 3e-22
Identities = 49/91 (53%), Positives = 64/91 (70%)
Frame = +1
Query: 256 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQE 435
G+ DNF+ +LKDGTLLCK AN I IKK+ F CMENINAF+E A++ GVP +E
Sbjct: 46 GERDNFHNLLKDGTLLCKAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEE 105
Query: 436 TFQTVDLWERQNLNSVVICLQSLGKRLEPTG 528
TFQ+V+L E ++L SV + L SLG+ L+ G
Sbjct: 106 TFQSVELVEGRDLFSVCVTLLSLGRVLQKAG 136
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 128 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENT*G 259
NR T G ++K +SK+ ++ A LEWI+ ++GE +T G
Sbjct: 3 NRTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSG 46
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 99 bits (238), Expect = 2e-21
Identities = 49/93 (52%), Positives = 66/93 (70%)
Frame = +1
Query: 256 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQE 435
GD DN +V +DG+LLC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V E
Sbjct: 51 GDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSE 109
Query: 436 TFQTVDLWERQNLNSVVICLQSLGKRLEPTGSR 534
FQTVDL+E Q+ N+V+ICL SL ++ E R
Sbjct: 110 LFQTVDLYEGQDPNAVLICLASLARKSEKNFGR 142
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = +3
Query: 489 LLAVTGQKAGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGINFGN 668
L ++ + +G+ +GPKEA+ + R +++EQL+AG VI LQ GSNKGA SG+N GN
Sbjct: 129 LASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMGN 188
Query: 669 TRHM 680
TRHM
Sbjct: 189 TRHM 192
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2
Query: 122 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENT*G 259
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T G
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQG 51
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 99 bits (238), Expect = 2e-21
Identities = 49/93 (52%), Positives = 66/93 (70%)
Frame = +1
Query: 256 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQE 435
GD DN +V +DG+LLC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V E
Sbjct: 51 GDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSE 109
Query: 436 TFQTVDLWERQNLNSVVICLQSLGKRLEPTGSR 534
FQTVDL+E Q+ N+V+ICL SL ++ E R
Sbjct: 110 LFQTVDLYEGQDPNAVLICLASLARKSEKNFGR 142
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = +3
Query: 489 LLAVTGQKAGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGINFGN 668
L ++ + +G+ +GPKEA+ + R +++EQL+AG VI LQ GSNKGA SG+N GN
Sbjct: 129 LASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMGN 188
Query: 669 TRHM 680
TRHM
Sbjct: 189 TRHM 192
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2
Query: 122 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENT*G 259
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T G
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQG 51
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 92.3 bits (219), Expect = 4e-19
Identities = 46/88 (52%), Positives = 58/88 (65%)
Frame = +1
Query: 265 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQ 444
DNF E LKDG LCKL N I +KKI F C+ENIN F AAR LGV +ETFQ
Sbjct: 52 DNFREQLKDGQRLCKLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQ 111
Query: 445 TVDLWERQNLNSVVICLQSLGKRLEPTG 528
+VDL++ ++L SV + LQSL +++E G
Sbjct: 112 SVDLFDGRDLFSVTVTLQSLARKVEKLG 139
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +1
Query: 280 VLKDGTLLCKLANNIHPNMIKKINTS-SMAFKCMENINAFLEAARQLGVPAQETFQTVDL 456
+LKDG +LCKL + P+ N MAF MENI+ FL AA+Q GV FQTVDL
Sbjct: 58 LLKDGVMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDL 117
Query: 457 WERQNLNSVVICLQSLGKRLEPTGSRQ*DRKKLRRTCETSPR 582
+E + V+ CL+ L + S + + ++SPR
Sbjct: 118 YENKQCYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPR 159
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 483 RDLLAVTGQKAGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGIN 659
R L AV ++ P+ K A+ + R F E +R G+ VI LQYG+NK A+Q G++
Sbjct: 131 RLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQKGMS 189
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 128 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGE 241
N G + E Q+K ++++ E A E L+WI +TGE
Sbjct: 3 NHGPSYGLSRELQKKNDARFVLEEAIEVLKWIENVTGE 40
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 44.4 bits (100), Expect = 9e-05
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +1
Query: 241 TREHLGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEA 405
T + G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 22 TTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFC 81
Query: 406 ARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGKRLE 519
+ + F DL+ V+ L L E
Sbjct: 82 KTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFLSHTKE 119
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 44.4 bits (100), Expect = 9e-05
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +1
Query: 241 TREHLGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEA 405
T + G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 54 TTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFC 113
Query: 406 ARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGKRLE 519
+ + F DL+ V+ L L E
Sbjct: 114 KTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFLSHTKE 151
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 44.4 bits (100), Expect = 9e-05
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +1
Query: 241 TREHLGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEA 405
T + G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 54 TTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFC 113
Query: 406 ARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGKRLE 519
+ + F DL+ V+ L L E
Sbjct: 114 KTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFLSHTKE 151
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINT--SSMA-FKCMENINAFLEAARQLGVP 426
GD+ +F L DG LCK N +HP I ++ SS+A + N++ FL+ R++GVP
Sbjct: 540 GDI-SFSLQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVP 598
Query: 427 AQETFQTVDLWERQNLNSVVICLQSLGK 510
+D+ ++N V + ++ K
Sbjct: 599 ETTLCSQMDIISKRNPQKVARTVLTVAK 626
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 35.9 bits (79), Expect = 0.033
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 426 GTGNFSNCRPVGETESQLRRDLLAVTGQKAGTYGKPSIGPKEAEKNVRNFSEEQLRAGQG 605
GTG S S L + T + A G IG +VR + +Q R QG
Sbjct: 182 GTGGASEVPEEKARASDGIVPLQSGTNKLASQAGMTGIGMPRIV-DVRR-TNDQDRDSQG 239
Query: 606 VISLQYGSNKGANQSGI-NFGNTRH 677
I LQ G+NK ANQ+G+ FG RH
Sbjct: 240 FIHLQMGTNKFANQAGMTGFGMPRH 264
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 576 SEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 674
++E+L +G+I +Q GSNK A+Q G+ FG R
Sbjct: 92 TKEKLMRSEGIIPIQAGSNKYASQKGMTGFGVPR 125
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 579 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 674
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 585 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 677
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 558 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 677
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 579 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 674
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 585 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 677
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 558 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 677
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 579 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 674
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 585 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 677
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 558 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 677
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 579 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 674
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 585 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 677
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 558 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 677
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 579 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 674
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 585 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 677
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 558 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 677
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 579 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 674
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 307 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 339
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 585 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 677
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 443 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 474
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 558 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 677
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 199 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 239
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 579 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 674
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 585 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 677
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 558 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 677
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 579 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 674
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 585 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 677
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 558 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 677
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 576 SEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 674
++E+L +G+I +Q GSNK A+Q G+ FG R
Sbjct: 92 TKEKLMRSEGIIPIQAGSNKYASQKGMTGFGVPR 125
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 567 RNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 677
++ EE + +G++ LQ G+NK A+Q G+ FG R+
Sbjct: 241 KDIEEELKQKSEGIVPLQSGTNKLASQRGMTGFGTPRN 278
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 KPRERSTANTARSWP--TSPWNGFG*SPANQRTPRGYGQLLRSA*RRHSSVQASQQH 323
KP+ERS A P ++ NGF P N P G QLL S ++ Q QH
Sbjct: 106 KPKERSPPAAASPLPDFSNLMNGFMFDPLNMSNPNGMMQLL-SMVQQQQQQQQHHQH 161
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 KPRERSTANTARSWP--TSPWNGFG*SPANQRTPRGYGQLLRSA*RRHSSVQASQQH 323
KP+ERS A P ++ NGF P N P G QLL S ++ Q QH
Sbjct: 106 KPKERSPPAAASPLPDFSNLMNGFMFDPLNMSNPNGMMQLL-SMVQQQQQQQQHHQH 161
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 159 KPRERSTANTARSWP--TSPWNGFG*SPANQRTPRGYGQLLRSA*RRHSSVQASQQH 323
KP+ERS A P ++ NGF P N P G QLL S ++ Q QH
Sbjct: 106 KPKERSPPAAASPLPDFSNLMNGFMFDPLNMSNPNGMMQLL-SMVQQQQQQQQHHQH 161
>U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical
protein C41A3.2a protein.
Length = 795
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +1
Query: 166 EKD-QQQIQRGAGP---RVLGMDSDDHRRTREHLGDMDNFYEVLKDGTLLCKLANNIHPN 333
E+D Q++ +RG GP R+ M R EH+ + D Y V+ L K + +
Sbjct: 506 ERDAQKRARRGYGPDPTRIKEM-LKSRDRLSEHIREKDIAYRVIGSKLFLDKRISELAEE 564
Query: 334 MIKKINTSSMAFKCMENINAFLEAARQLGV 423
+INTS +K +E + A ++ +
Sbjct: 565 TSMEINTSK--YKMLEKYRVRITAVEKMNI 592
>Z81498-2|CAB04085.1| 760|Caenorhabditis elegans Hypothetical
protein F11A6.1b protein.
Length = 760
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 232 HRRTREHLGDMDNFYEVLKDGTLLCKLANNIHPN 333
+RR R H D D F E DGT + K N HP+
Sbjct: 141 YRRIRRHTDDNDIFEED-DDGTQISKSRNRKHPD 173
>Z81498-1|CAB04086.1| 692|Caenorhabditis elegans Hypothetical
protein F11A6.1a protein.
Length = 692
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 232 HRRTREHLGDMDNFYEVLKDGTLLCKLANNIHPN 333
+RR R H D D F E DGT + K N HP+
Sbjct: 141 YRRIRRHTDDNDIFEED-DDGTQISKSRNRKHPD 173
>U12682-1|AAB63525.1| 692|Caenorhabditis elegans celfurPC protein
protein.
Length = 692
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 232 HRRTREHLGDMDNFYEVLKDGTLLCKLANNIHPN 333
+RR R H D D F E DGT + K N HP+
Sbjct: 141 YRRIRRHTDDNDIFEED-DDGTQISKSRNRKHPD 173
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical protein
F31E3.4 protein.
Length = 1131
Score = 27.9 bits (59), Expect = 8.7
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Frame = -3
Query: 620 LKRYDSLTSPELLLGE---VSHVLLSF-FRSY*RLPVGSSLLPSDCKQITTELRFCLSHR 453
+K + + S +L L E S+ + S +S LP L+ D + I +
Sbjct: 868 VKTSEDIISNDLFLAEENLASNGMTSLAVQSLEELPKEKELVGLDAEFIKIKTDLLEFDG 927
Query: 452 STV*KVSCAGTPNCLAASRKALIFSMHLKAIDDVLI--FLIMFGWMLLASL 306
TV ++ G +C+ ++ + +IF H+K DDV + +L F ++ A L
Sbjct: 928 KTV-QMRAVGRASCVDSTGERIIFDDHVKLTDDVEVVDYLTKFSGIVKADL 977
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,308,724
Number of Sequences: 27780
Number of extensions: 434187
Number of successful extensions: 1197
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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