Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1876X
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       27   0.53 
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         23   5.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.7  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   8.7  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   8.7  

>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 26.6 bits (56), Expect = 0.53
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = +1

Query: 157 PKFPNESEKNGKCSSAEYKLEGDVVKVKN 243
           P + ++ E++   ++AE+ L+ DV++V N
Sbjct: 168 PCYDDDDEEDAAAAAAEFPLQKDVIRVTN 196


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 324 TVTFKFGEISRDGSVQVLATDYNNYAIAYNCKYDD 428
           T+TFK G+         LATDY    +  +  + D
Sbjct: 53  TLTFKDGQTYTQAIAFTLATDYGTVRLMSSYNFTD 87


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 286 PSSP--TTPIKPQS*QSLSSLEKYHAMDQFKSWRLTIITTP 402
           P++P  T P+KP++   LSS+    + + F   ++  I +P
Sbjct: 194 PNAPCFTAPVKPKARNLLSSVSTTPSPEVFSPKKMENIESP 234


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
          homeotic protein IVa protein.
          Length = 310

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 74 TSAVAAASRGSSTSLGM 24
          T+A AAA RG   SLGM
Sbjct: 33 TAAAAAAYRGFPLSLGM 49


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
          homeotic protein IIa protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 74 TSAVAAASRGSSTSLGM 24
          T+A AAA RG   SLGM
Sbjct: 33 TAAAAAAYRGFPLSLGM 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,699
Number of Sequences: 2352
Number of extensions: 9496
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)