Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1876X
(547 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 50 7e-06
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 50 7e-06
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 50 7e-06
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 50 7e-06
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 50 7e-06
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 50 7e-06
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 50 7e-06
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 40 0.006
BC016633-1|AAH16633.1| 367|Homo sapiens KIAA1456 protein protein. 29 8.0
AB040889-1|BAA95980.1| 421|Homo sapiens KIAA1456 protein protein. 29 8.0
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 EVIHEGTCPELKPVNNFNLTAYQGIWYEIPKFPNESEKNGKCSSAEYKL-EGDVVKVKN 243
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLN 78
Score = 45.6 bits (103), Expect = 1e-04
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 189 QMLFS*IQTGR*RGEGQE-RAYHDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGS 365
Q +S ++ G+ + QE RA DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA--DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAP 117
Query: 366 VQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKL 482
+LATDY NYA+ Y+C + H F WIL+RN L
Sbjct: 118 YWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNL 155
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 EVIHEGTCPELKPVNNFNLTAYQGIWYEIPKFPNESEKNGKCSSAEYKL-EGDVVKVKN 243
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLN 78
Score = 45.6 bits (103), Expect = 1e-04
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 189 QMLFS*IQTGR*RGEGQE-RAYHDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGS 365
Q +S ++ G+ + QE RA DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA--DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAP 117
Query: 366 VQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKL 482
+LATDY NYA+ Y+C + H F WIL+RN L
Sbjct: 118 YWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNL 155
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 EVIHEGTCPELKPVNNFNLTAYQGIWYEIPKFPNESEKNGKCSSAEYKL-EGDVVKVKN 243
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLN 78
Score = 45.6 bits (103), Expect = 1e-04
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 189 QMLFS*IQTGR*RGEGQE-RAYHDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGS 365
Q +S ++ G+ + QE RA DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA--DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAP 117
Query: 366 VQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKL 482
+LATDY NYA+ Y+C + H F WIL+RN L
Sbjct: 118 YWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNL 155
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 EVIHEGTCPELKPVNNFNLTAYQGIWYEIPKFPNESEKNGKCSSAEYKL-EGDVVKVKN 243
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLN 78
Score = 45.6 bits (103), Expect = 1e-04
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 189 QMLFS*IQTGR*RGEGQE-RAYHDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGS 365
Q +S ++ G+ + QE RA DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA--DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAP 117
Query: 366 VQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKL 482
+LATDY NYA+ Y+C + H F WIL+RN L
Sbjct: 118 YWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNL 155
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 EVIHEGTCPELKPVNNFNLTAYQGIWYEIPKFPNESEKNGKCSSAEYKL-EGDVVKVKN 243
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLN 78
Score = 45.6 bits (103), Expect = 1e-04
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 189 QMLFS*IQTGR*RGEGQE-RAYHDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGS 365
Q +S ++ G+ + QE RA DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA--DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAP 117
Query: 366 VQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKL 482
+LATDY NYA+ Y+C + H F WIL+RN L
Sbjct: 118 YWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNL 155
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 EVIHEGTCPELKPVNNFNLTAYQGIWYEIPKFPNESEKNGKCSSAEYKL-EGDVVKVKN 243
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLN 78
Score = 45.6 bits (103), Expect = 1e-04
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 189 QMLFS*IQTGR*RGEGQE-RAYHDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGS 365
Q +S ++ G+ + QE RA DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA--DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAP 117
Query: 366 VQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKL 482
+LATDY NYA+ Y+C + H F WIL+RN L
Sbjct: 118 YWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNL 155
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 EVIHEGTCPELKPVNNFNLTAYQGIWYEIPKFPNESEKNGKCSSAEYKL-EGDVVKVKN 243
+ H G CP NF++ Y G WYEI K P E NG+C A Y L E +KV N
Sbjct: 21 QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENGKIKVLN 78
Score = 45.6 bits (103), Expect = 1e-04
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 189 QMLFS*IQTGR*RGEGQE-RAYHDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGS 365
Q +S ++ G+ + QE RA DG IEG A + + AKL V KF
Sbjct: 63 QANYSLMENGKIKVLNQELRA--DGTVNQIEGEATPVN-LTEPAKLEV--KFSWFMPSAP 117
Query: 366 VQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKL 482
+LATDY NYA+ Y+C + H F WIL+RN L
Sbjct: 118 YWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNL 155
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 39.9 bits (89), Expect = 0.006
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = +3
Query: 315 AKLTVTFKFGEISRDGSVQVLATDYNNYAIAYNCKYDDKKKSHQVFVWILSRNKKL 482
AKL V KF +LATDY NYA+ Y+C + H F WIL+RN L
Sbjct: 12 AKLEV--KFSWFMPSAPYWILATDYENYALVYSCTC-IIQLFHVDFAWILARNPNL 64
>BC016633-1|AAH16633.1| 367|Homo sapiens KIAA1456 protein protein.
Length = 367
Score = 29.5 bits (63), Expect = 8.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 400 PSLTTANTMTRKSLIKCSSGSSLETRSLKATLKLLSKFHQGPLQRD 537
P T ++ + ++ SSG LE TLK L+ HQG ++R+
Sbjct: 212 PFSTKEQSLDEEVFVESSSGKHLEWLRAPGTLKHLNGDHQGEMRRN 257
>AB040889-1|BAA95980.1| 421|Homo sapiens KIAA1456 protein protein.
Length = 421
Score = 29.5 bits (63), Expect = 8.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 400 PSLTTANTMTRKSLIKCSSGSSLETRSLKATLKLLSKFHQGPLQRD 537
P T ++ + ++ SSG LE TLK L+ HQG ++R+
Sbjct: 266 PFSTKEQSLDEEVFVESSSGKHLEWLRAPGTLKHLNGDHQGEMRRN 311
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,076,298
Number of Sequences: 237096
Number of extensions: 1381307
Number of successful extensions: 2849
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2841
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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