Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1874
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         71   5e-14
AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    28   0.36 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.5  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   7.8  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 70.5 bits (165), Expect = 5e-14
 Identities = 35/84 (41%), Positives = 44/84 (52%)
 Frame = +1

Query: 4   GGQDCSGEPLYVARAVHEGATIPGKLVPSHGCAYVPWGGIEHGKPQYQILVGGPNNWVPT 183
           GG D  G  ++V RA H G  +P K++P    AYV +GG E      ++LV     W   
Sbjct: 21  GGVDSDGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYGGQETLVEHVEVLVHKQLIWDTA 80

Query: 184 SGSNVPPGAFPGGETEDGEPLYIG 255
           S   VP GA  GG T DGE LY+G
Sbjct: 81  SAGQVPLGAVVGGHTSDGEILYVG 104



 Score = 60.1 bits (139), Expect = 7e-11
 Identities = 26/51 (50%), Positives = 32/51 (62%)
 Frame = +1

Query: 1   VGGQDCSGEPLYVARAVHEGATIPGKLVPSHGCAYVPWGGIEHGKPQYQIL 153
           VGG    GE LYV RA HEG+   GK+  SH C Y+P+GG E   P Y++L
Sbjct: 91  VGGHTSDGEILYVGRAYHEGSQTIGKVQCSHNCIYIPYGGAEVSVPTYEVL 141



 Score = 43.2 bits (97), Expect = 9e-06
 Identities = 21/37 (56%), Positives = 23/37 (62%)
 Frame = +3

Query: 255 RVRHEGSLTNGKVQQSHGVC*ISFGGQELGFPDYEVL 365
           R  HEGS T GKVQ SH    I +GG E+  P YEVL
Sbjct: 105 RAYHEGSQTIGKVQCSHNCIYIPYGGAEVSVPTYEVL 141



 Score = 29.9 bits (64), Expect = 0.090
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 172 WVPTSGSN-VPPGAFPGGETEDGEPLYIG 255
           W+PTS     PP   PGG   DG  +++G
Sbjct: 5   WIPTSVHGPYPPHMVPGGVDSDGAQIFVG 33



 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 255 RVRHEGSLTNGKVQQSHGVC*ISFGGQELGFPDYEVLM 368
           R  H G L   KV        +++GGQE      EVL+
Sbjct: 34  RAHHAGDLLPAKVIPDKTAAYVAYGGQETLVEHVEVLV 71


>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -2

Query: 359 FVVRESKLLSTKRNLADAVRLLNLAVGEATFVADTPMYKGSPSS-VSPPGN 210
           +V+  +  L+ K+ L +  RL+N+ +GE     DT    G+P     PP N
Sbjct: 152 YVLTAAHCLANKK-LDEGERLVNVRLGEYNTATDTDCADGNPDDCADPPQN 201


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
 Frame = +1

Query: 160  GPNNWVPTSGSNV-----PPGAFPGGETEDGEPLYIGVSATKVASPTARFNSLT--ASAK 318
            GP N  P+S + V     PP A    E    +P     +AT  A+ T +  SLT   +  
Sbjct: 1334 GPANAAPSSPAGVLVAKVPPVAVEDIENSKQQPPVQQTAATSAAAGTGQQPSLTTGGAVP 1393

Query: 319  FRLVDRSLDSRTTKS 363
            F+L+ +    +  K+
Sbjct: 1394 FKLLTKKSRDQALKA 1408


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 136 PQYQILVGGPNNWVPTSGSNVPPGAFPGGETEDGEPLYIGV 258
           P    L+GGPN+ +P   S   PG  P  + +  +   +G+
Sbjct: 101 PHSNHLLGGPNHHLPPGAS---PGLVPPPQQQQQQQAPLGI 138


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 473 MFHTGSFDLQQKKQMVDYFHDYSSI 547
           + + G+ DL   + M+D  HD++ +
Sbjct: 272 LVNVGTVDLLHGRAMIDLIHDFNQL 296


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,064
Number of Sequences: 2352
Number of extensions: 20180
Number of successful extensions: 75
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)