Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1871
         (789 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.7  
EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     23   8.1  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.1  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   8.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.1  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 236 CIRRCQSQNGLFFYDIFCRRC 174
           C  RC+   G  F++ FC+ C
Sbjct: 639 CHPRCKKCTGYGFHEQFCQEC 659


>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 529 LLDFIVKKRNTVNVIKAKNFRIFY 600
           LLD I K+    N+++++NF+ F+
Sbjct: 111 LLDLICKECLPFNLVESENFKKFF 134


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 400 GPPKSLSCEEKSQKLSKPTTR 462
           G  K+L+   KSQ LS PT R
Sbjct: 264 GNSKNLTGSPKSQNLSSPTIR 284


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 78  NIISDETLVIEPPPGLEDKDDDHDIEITVDQSTSPTKNVIEKQSVLRLTAS 230
           N+I D  L +  P G+E      DI ITV   +     ++   +V R+  S
Sbjct: 674 NVIYDGVLTLALPHGVEITGFADDIAITVSAVSIEEVEMLATDAVGRIDRS 724


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +3

Query: 108  EPPPGLEDKDDDHDIE---ITVDQSTSPTKNVIEKQSVLRLT 224
            +P P  +  DDD D+E    T   STS       ++S + LT
Sbjct: 1117 QPAPSNDSDDDDDDVENRQATNAASTSEAARTAAEESRVGLT 1158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,831
Number of Sequences: 2352
Number of extensions: 13926
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)