Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1865
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068540-1|AAH68540.1| 823|Homo sapiens COG5 protein protein. 47 8e-05
AC002381-1|AAB63816.2| 238|Homo sapiens unknown protein. 47 8e-05
AF058718-1|AAC69276.1| 839|Homo sapiens putative 13 S Golgi tra... 46 1e-04
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 31 4.0
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 31 4.0
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 31 4.0
BC035501-1|AAH35501.3| 415|Homo sapiens kazrin protein. 31 5.3
AY505122-1|AAS86437.1| 327|Homo sapiens kazrin isoform D protein. 31 5.3
AY505121-1|AAS86436.1| 327|Homo sapiens kazrin isoform C protein. 31 5.3
AY505120-1|AAS86435.1| 415|Homo sapiens kazrin isoform B protein. 31 5.3
AY505119-1|AAS86434.1| 421|Homo sapiens kazrin isoform A protein. 31 5.3
AL391215-3|CAI13901.1| 758|Homo sapiens novel protein protein. 31 5.3
AL391215-1|CAI13899.1| 415|Homo sapiens novel protein protein. 31 5.3
AL035405-5|CAI19832.1| 758|Homo sapiens novel protein protein. 31 5.3
AL035405-1|CAI19827.1| 415|Homo sapiens novel protein protein. 31 5.3
AL034395-1|CAI19921.1| 758|Homo sapiens novel protein protein. 31 5.3
AB028949-1|BAA82978.1| 519|Homo sapiens KIAA1026 protein protein. 31 5.3
AB015329-1|BAA88115.1| 261|Homo sapiens HRIHFB2003 protein. 31 5.3
>BC068540-1|AAH68540.1| 823|Homo sapiens COG5 protein protein.
Length = 823
Score = 46.8 bits (106), Expect = 8e-05
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Frame = +2
Query: 80 EIENDEFYSKFLNDS--IKPLVGENLS---VTDQVTKLAQGIEKLGKSLEKQVLAKHNDL 244
E+ D YS FLN+ +K +++ + +Q+ KLAQGI +L + L QV+A+H DL
Sbjct: 58 ELLQDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDL 117
Query: 245 LTQ 253
L Q
Sbjct: 118 LAQ 120
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +1
Query: 262 ISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASKIL 441
I LE L+ +Q+++ L +++K ++ PY + +T L R+Q C+LLR +IL
Sbjct: 124 IESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRIL 183
Query: 442 TLWNKLRTIKDNPSKE 489
L +L+ S+E
Sbjct: 184 NLSKRLQGQLQGGSRE 199
>AC002381-1|AAB63816.2| 238|Homo sapiens unknown protein.
Length = 238
Score = 46.8 bits (106), Expect = 8e-05
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Frame = +2
Query: 80 EIENDEFYSKFLNDS--IKPLVGENLS---VTDQVTKLAQGIEKLGKSLEKQVLAKHNDL 244
E+ D YS FLN+ +K +++ + +Q+ KLAQGI +L + L QV+A+H DL
Sbjct: 58 ELLQDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDL 117
Query: 245 LTQ 253
L Q
Sbjct: 118 LAQ 120
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +1
Query: 262 ISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASKIL 441
I LE L+ +Q+++ L +++K ++ PY + +T L R+Q C+LLR +IL
Sbjct: 124 IESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRIL 183
Query: 442 TLWNKLRTIKDNPSKE 489
L +L+ S+E
Sbjct: 184 NLSKRLQGQLQGGSRE 199
>AF058718-1|AAC69276.1| 839|Homo sapiens putative 13 S Golgi
transport complex 90kD subunit brain-specific isoform
protein.
Length = 839
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = +1
Query: 262 ISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASKIL 441
I LE L+ +Q+++ L +++K ++ PY + +T L R+Q C+LLR +IL
Sbjct: 124 IESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRIL 183
Query: 442 TLWNKLRTIKDNPSKE 489
L +L+ S+E
Sbjct: 184 NLSKRLQGQLQGGSRE 199
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Frame = +2
Query: 80 EIENDEFYSKFLNDS--IKPLVGENLS---VTDQVTKLAQGIEKLGKSLEKQVLAKHNDL 244
E+ D YS FLN+ +K +++ + +Q+ KLAQGI +L + L QV+ +H DL
Sbjct: 58 ELLQDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVVRHEDL 117
Query: 245 LTQ 253
L Q
Sbjct: 118 LAQ 120
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 292 VQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTC--NLLRHASKILTLW-NKLR 462
+Q VQ +L ++ R +TP LEN I + R+ C + + + W LR
Sbjct: 740 MQPYVQMVLNNLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLR 799
Query: 463 TIKDNPSKEA 492
I+DN K++
Sbjct: 800 NIRDNEEKDS 809
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 292 VQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTC--NLLRHASKILTLW-NKLR 462
+Q VQ +L ++ R +TP LEN I + R+ C + + + W LR
Sbjct: 740 MQPYVQMVLNNLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLR 799
Query: 463 TIKDNPSKEA 492
I+DN K++
Sbjct: 800 NIRDNEEKDS 809
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 31.1 bits (67), Expect = 4.0
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 292 VQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTC--NLLRHASKILTLW-NKLR 462
+Q VQ +L ++ R +TP LEN I + R+ C + + + W LR
Sbjct: 904 MQPYVQMVLNNLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLR 963
Query: 463 TIKDNPSKEA 492
I+DN K++
Sbjct: 964 NIRDNEEKDS 973
>BC035501-1|AAH35501.3| 415|Homo sapiens kazrin protein.
Length = 415
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 151 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 208
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 209 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 246
>AY505122-1|AAS86437.1| 327|Homo sapiens kazrin isoform D protein.
Length = 327
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 63 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 120
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 121 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 158
>AY505121-1|AAS86436.1| 327|Homo sapiens kazrin isoform C protein.
Length = 327
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 63 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 120
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 121 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 158
>AY505120-1|AAS86435.1| 415|Homo sapiens kazrin isoform B protein.
Length = 415
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 151 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 208
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 209 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 246
>AY505119-1|AAS86434.1| 421|Homo sapiens kazrin isoform A protein.
Length = 421
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 157 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 214
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 215 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 252
>AL391215-3|CAI13901.1| 758|Homo sapiens novel protein protein.
Length = 758
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 157 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 214
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 215 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 252
>AL391215-1|CAI13899.1| 415|Homo sapiens novel protein protein.
Length = 415
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 151 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 208
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 209 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 246
>AL035405-5|CAI19832.1| 758|Homo sapiens novel protein protein.
Length = 758
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 157 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 214
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 215 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 252
>AL035405-1|CAI19827.1| 415|Homo sapiens novel protein protein.
Length = 415
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 151 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 208
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 209 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 246
>AL034395-1|CAI19921.1| 758|Homo sapiens novel protein protein.
Length = 758
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 157 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 214
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 215 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 252
>AB028949-1|BAA82978.1| 519|Homo sapiens KIAA1026 protein protein.
Length = 519
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 255 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 312
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 313 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 350
>AB015329-1|BAA88115.1| 261|Homo sapiens HRIHFB2003 protein.
Length = 261
Score = 30.7 bits (66), Expect = 5.3
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 256 SHISDLENTLESVQSQVQNLLRGAEKLKERVHTPYYALENQTIMLERVQTTCNLLRHASK 435
S + L TLES + Q+++ +R E+ ++ AL + +LER + L R A +
Sbjct: 49 SQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREK--WELRRQAKE 106
Query: 436 ILTLWNKLRT---IKDNPSKEAIILFDLMN*SVITISK 540
LR+ +KDN KE + S+ T++K
Sbjct: 107 ATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTK 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,343,629
Number of Sequences: 237096
Number of extensions: 1837723
Number of successful extensions: 7860
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7860
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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