Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1863
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        25   1.6  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    25   2.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.7  
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    24   3.6  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   8.3  

>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 151 YPRRRMYKIRGIENCNTRNRYIELFFKYYSLINQMMVNSMAILDVT 288
           Y    ++ +R ++  NT      LFF  YSL N +++      D T
Sbjct: 52  YKGESIFTLRLLDAINTATPNENLFFSPYSLYNVLLMMYFGARDTT 97


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 534 LTLKTICVFGLESRRIVLLMRLPCRVPRT 448
           L L T+C F L  R   LL   PC   RT
Sbjct: 9   LLLFTLCPFALAKRSFSLLSSDPCLEKRT 37


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 372 IALNYYRNSRLCVKWFAIYITKGTPSSLEHD 464
           I ++ YRN+   V+WF+        S+ E D
Sbjct: 80  IRISIYRNNERAVRWFSRSFDHSAKSTFEID 110


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +1

Query: 118 RKGSQKKIINRYPRRRMYKIR 180
           +KGS+KK+++ + R+  Y ++
Sbjct: 14  KKGSKKKVVDPFTRKDWYDVK 34


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 336 IALDFLIALDFLIALNYYRNSRLCVKWFA 422
           I L+FL  + FL+ L  Y    + +KW A
Sbjct: 565 IVLEFLPQIIFLVLLFAYMVFMMFMKWIA 593


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,164
Number of Sequences: 2352
Number of extensions: 12699
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)